Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RPS26P3-201ENST00000470205 348 ntBASIC3.76□□□□□ -1.81
PDGFBP01127 RPS3AP14-201ENST00000483907 780 ntBASIC3.76□□□□□ -1.81
PDGFBP01127 AC090543.2-201ENST00000483963 348 ntBASIC3.76□□□□□ -1.81
PDGFBP01127 AC004057.1-201ENST00000485827 348 ntBASIC3.76□□□□□ -1.81
PDGFBP01127 RN7SL504P-201ENST00000494496 287 ntBASIC3.76□□□□□ -1.81
PDGFBP01127 AC068305.1-201ENST00000497406 726 ntBASIC3.76□□□□□ -1.81
PDGFBP01127 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.76□□□□□ -1.81
PDGFBP01127 RAC1P2-201ENST00000511164 579 ntBASIC3.76□□□□□ -1.81
PDGFBP01127 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PDGFBP01127 AC008802.1-201ENST00000519121 791 ntBASIC3.76□□□□□ -1.81
PDGFBP01127 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.76□□□□□ -1.81
PDGFBP01127 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.76□□□□□ -1.81
PDGFBP01127 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.76□□□□□ -1.81
PDGFBP01127 LSM6P2-201ENST00000552208 177 ntBASIC3.76□□□□□ -1.81
PDGFBP01127 ZNF971P-201ENST00000562068 1249 ntBASIC3.76□□□□□ -1.81
PDGFBP01127 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.76□□□□□ -1.81
PDGFBP01127 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.76□□□□□ -1.81
PDGFBP01127 AC007599.1-201ENST00000568688 1174 ntBASIC3.76□□□□□ -1.81
PDGFBP01127 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.76□□□□□ -1.81
PDGFBP01127 AC011458.1-201ENST00000604034 617 ntBASIC3.76□□□□□ -1.81
PDGFBP01127 AL390816.3-201ENST00000604527 1066 ntBASIC3.76□□□□□ -1.81
PDGFBP01127 AC002487.1-201ENST00000604565 994 ntBASIC3.76□□□□□ -1.81
PDGFBP01127 SNORA62.6-201ENST00000606322 83 ntBASIC3.76□□□□□ -1.81
PDGFBP01127 AL354760.1-201ENST00000608357 643 ntBASIC3.76□□□□□ -1.81
PDGFBP01127 MIR7154-201ENST00000620673 73 ntBASIC3.76□□□□□ -1.81
PDGFBP01127 AC097504.1-201ENST00000515103 2415 ntBASIC3.76□□□□□ -1.81
PDGFBP01127 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDGFBP01127 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.76□□□□□ -1.81
PDGFBP01127 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDGFBP01127 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDGFBP01127 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.76□□□□□ -1.81
PDGFBP01127 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.76□□□□□ -1.81
PDGFBP01127 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDGFBP01127 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PDGFBP01127 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PDGFBP01127 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.75□□□□□ -1.81
PDGFBP01127 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
PDGFBP01127 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.75□□□□□ -1.81
PDGFBP01127 RNU1-15P-201ENST00000353977 144 ntBASIC3.75□□□□□ -1.81
PDGFBP01127 RNU6-1181P-201ENST00000384191 106 ntBASIC3.75□□□□□ -1.81
PDGFBP01127 AL138880.1-201ENST00000405824 642 ntBASIC3.75□□□□□ -1.81
PDGFBP01127 RNA5SP104-201ENST00000410989 118 ntBASIC3.75□□□□□ -1.81
PDGFBP01127 BX323014.1-201ENST00000412876 237 ntBASIC3.75□□□□□ -1.81
PDGFBP01127 BTF3P8-201ENST00000414577 526 ntBASIC3.75□□□□□ -1.81
PDGFBP01127 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.75□□□□□ -1.81
PDGFBP01127 DBIP2-201ENST00000419076 262 ntBASIC3.75□□□□□ -1.81
PDGFBP01127 OR1AA1P-201ENST00000419597 916 ntBASIC3.75□□□□□ -1.81
PDGFBP01127 MTND2P9-201ENST00000422293 931 ntBASIC3.75□□□□□ -1.81
PDGFBP01127 COTL1P1-201ENST00000422309 375 ntBASIC3.75□□□□□ -1.81
PDGFBP01127 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.75□□□□□ -1.81
PDGFBP01127 AL513174.1-201ENST00000423182 629 ntBASIC3.75□□□□□ -1.81
PDGFBP01127 PTP4A1P7-201ENST00000423476 514 ntBASIC3.75□□□□□ -1.81
PDGFBP01127 AC234064.1-201ENST00000436312 247 ntBASIC3.75□□□□□ -1.81
PDGFBP01127 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.75□□□□□ -1.81
PDGFBP01127 SNORA71B-202ENST00000439232 272 ntBASIC3.75□□□□□ -1.81
PDGFBP01127 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.75□□□□□ -1.81
PDGFBP01127 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.75□□□□□ -1.81
PDGFBP01127 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.75□□□□□ -1.81
PDGFBP01127 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.75□□□□□ -1.81
PDGFBP01127 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.75□□□□□ -1.81
PDGFBP01127 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.75□□□□□ -1.81
PDGFBP01127 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.75□□□□□ -1.81
PDGFBP01127 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.75□□□□□ -1.81
PDGFBP01127 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.75□□□□□ -1.81
PDGFBP01127 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.75□□□□□ -1.81
PDGFBP01127 AC119751.4-201ENST00000507498 357 ntBASIC3.75□□□□□ -1.81
PDGFBP01127 PHBP14-201ENST00000512887 367 ntBASIC3.75□□□□□ -1.81
PDGFBP01127 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.75□□□□□ -1.81
PDGFBP01127 RNU6-276P-201ENST00000516114 96 ntBASIC3.75□□□□□ -1.81
PDGFBP01127 RNA5SP154-201ENST00000516193 111 ntBASIC3.75□□□□□ -1.81
PDGFBP01127 AP004371.1-201ENST00000525240 214 ntBASIC3.75□□□□□ -1.81
PDGFBP01127 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.75□□□□□ -1.81
PDGFBP01127 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.75□□□□□ -1.81
PDGFBP01127 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.75□□□□□ -1.81
PDGFBP01127 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.75□□□□□ -1.81
PDGFBP01127 AC104763.3-201ENST00000613765 618 ntBASIC3.75□□□□□ -1.81
PDGFBP01127 AL121594.5-201ENST00000631724 573 ntBASIC3.75□□□□□ -1.81
PDGFBP01127 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.75□□□□□ -1.81
PDGFBP01127 AC099654.9-201ENST00000637055 678 ntBASIC3.75□□□□□ -1.81
PDGFBP01127 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
PDGFBP01127 ZNF807-201ENST00000328088 1707 ntBASIC3.75□□□□□ -1.81
PDGFBP01127 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PDGFBP01127 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PDGFBP01127 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.75□□□□□ -1.81
PDGFBP01127 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
PDGFBP01127 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
PDGFBP01127 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PDGFBP01127 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.74□□□□□ -1.81
PDGFBP01127 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
PDGFBP01127 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
PDGFBP01127 RNA5SP432-201ENST00000362480 116 ntBASIC3.74□□□□□ -1.81
PDGFBP01127 UBE2V1P2-201ENST00000397758 440 ntBASIC3.74□□□□□ -1.81
PDGFBP01127 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.74□□□□□ -1.81
PDGFBP01127 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.74□□□□□ -1.81
PDGFBP01127 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.74□□□□□ -1.81
PDGFBP01127 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.74□□□□□ -1.81
PDGFBP01127 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.74□□□□□ -1.81
PDGFBP01127 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.74□□□□□ -1.81
PDGFBP01127 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.74□□□□□ -1.81
PDGFBP01127 RPL21P8-201ENST00000465083 535 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms