Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 AP1S2P1-201ENST00000457344 379 ntBASIC6.45□□□□□ -1.38
PTCD1O75127 RNU6-261P-201ENST00000459506 102 ntBASIC6.45□□□□□ -1.38
PTCD1O75127 RN7SL385P-201ENST00000468873 276 ntBASIC6.45□□□□□ -1.38
PTCD1O75127 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC6.45□□□□□ -1.38
PTCD1O75127 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.45□□□□□ -1.38
PTCD1O75127 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PTCD1O75127 NPM1P41-201ENST00000512920 831 ntBASIC6.45□□□□□ -1.38
PTCD1O75127 RN7SKP276-201ENST00000516242 268 ntBASIC6.45□□□□□ -1.38
PTCD1O75127 AC012339.2-201ENST00000523996 453 ntBASIC6.45□□□□□ -1.38
PTCD1O75127 AP005597.4-201ENST00000526762 229 ntBASIC6.45□□□□□ -1.38
PTCD1O75127 AC055876.1-202ENST00000567053 138 ntBASIC6.45□□□□□ -1.38
PTCD1O75127 RPL26P30-202ENST00000602923 645 ntBASIC6.45□□□□□ -1.38
PTCD1O75127 PSMA6P4-201ENST00000603247 718 ntBASIC6.45□□□□□ -1.38
PTCD1O75127 AC115621.1-201ENST00000604653 858 ntBASIC6.45□□□□□ -1.38
PTCD1O75127 AC000123.2-201ENST00000623124 461 ntBASIC6.45□□□□□ -1.38
PTCD1O75127 AC005858.4-201ENST00000623191 700 ntBASIC6.45□□□□□ -1.38
PTCD1O75127 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
PTCD1O75127 AC138649.5-201ENST00000637456 137 ntBASIC6.45□□□□□ -1.38
PTCD1O75127 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PTCD1O75127 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.45□□□□□ -1.38
PTCD1O75127 MTND5P3-201ENST00000438536 1800 ntBASIC6.45□□□□□ -1.38
PTCD1O75127 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PTCD1O75127 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC6.45□□□□□ -1.38
PTCD1O75127 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
PTCD1O75127 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PTCD1O75127 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
PTCD1O75127 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
PTCD1O75127 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
PTCD1O75127 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.44□□□□□ -1.38
PTCD1O75127 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
PTCD1O75127 RNU6-28P-201ENST00000362378 107 ntBASIC6.44□□□□□ -1.38
PTCD1O75127 RNU6-1158P-201ENST00000391167 107 ntBASIC6.44□□□□□ -1.38
PTCD1O75127 RPL31P52-201ENST00000407532 367 ntBASIC6.44□□□□□ -1.38
PTCD1O75127 RNU6-373P-201ENST00000411247 98 ntBASIC6.44□□□□□ -1.38
PTCD1O75127 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC6.44□□□□□ -1.38
PTCD1O75127 ELOCP4-201ENST00000420090 333 ntBASIC6.44□□□□□ -1.38
PTCD1O75127 AC006548.1-201ENST00000427470 102 ntBASIC6.44□□□□□ -1.38
PTCD1O75127 OR2B7P-201ENST00000429302 934 ntBASIC6.44□□□□□ -1.38
PTCD1O75127 AL365400.1-201ENST00000431854 640 ntBASIC6.44□□□□□ -1.38
PTCD1O75127 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PTCD1O75127 HMGB3P9-201ENST00000441799 583 ntBASIC6.44□□□□□ -1.38
PTCD1O75127 FHP1-201ENST00000442741 703 ntBASIC6.44□□□□□ -1.38
PTCD1O75127 TPT1P12-201ENST00000448968 492 ntBASIC6.44□□□□□ -1.38
PTCD1O75127 AC233279.1-201ENST00000455300 423 ntBASIC6.44□□□□□ -1.38
PTCD1O75127 RPL23AP56-201ENST00000460778 453 ntBASIC6.44□□□□□ -1.38
PTCD1O75127 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC6.44□□□□□ -1.38
PTCD1O75127 RPL12P20-201ENST00000475538 479 ntBASIC6.44□□□□□ -1.38
PTCD1O75127 RPS3AP50-201ENST00000487064 803 ntBASIC6.44□□□□□ -1.38
PTCD1O75127 AC093278.1-201ENST00000494700 600 ntBASIC6.44□□□□□ -1.38
PTCD1O75127 RNU6-1220P-201ENST00000517126 108 ntBASIC6.44□□□□□ -1.38
PTCD1O75127 AL358913.1-201ENST00000554342 121 ntBASIC6.44□□□□□ -1.38
PTCD1O75127 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC6.44□□□□□ -1.38
PTCD1O75127 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC6.44□□□□□ -1.38
PTCD1O75127 AL356432.3-201ENST00000568952 465 ntBASIC6.44□□□□□ -1.38
PTCD1O75127 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.44□□□□□ -1.38
PTCD1O75127 MIR4504-201ENST00000577413 92 ntBASIC6.44□□□□□ -1.38
PTCD1O75127 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.44□□□□□ -1.38
PTCD1O75127 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.44□□□□□ -1.38
PTCD1O75127 AC243960.4-201ENST00000600532 288 ntBASIC6.44□□□□□ -1.38
PTCD1O75127 CR381572.1-201ENST00000625098 102 ntBASIC6.44□□□□□ -1.38
PTCD1O75127 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PTCD1O75127 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PTCD1O75127 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PTCD1O75127 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
PTCD1O75127 AC009313.2-201ENST00000417893 1941 ntBASIC6.44□□□□□ -1.38
PTCD1O75127 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PTCD1O75127 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
PTCD1O75127 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PTCD1O75127 AL450345.1-202ENST00000605741 3881 ntBASIC6.44□□□□□ -1.38
PTCD1O75127 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.44□□□□□ -1.38
PTCD1O75127 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.44□□□□□ -1.38
PTCD1O75127 AC105074.1-201ENST00000623380 3095 ntBASIC6.44□□□□□ -1.38
PTCD1O75127 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PTCD1O75127 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.43□□□□□ -1.38
PTCD1O75127 AC007159.1-201ENST00000566529 4706 ntBASIC6.43□□□□□ -1.38
PTCD1O75127 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.43□□□□□ -1.38
PTCD1O75127 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
PTCD1O75127 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PTCD1O75127 AC114546.3-201ENST00000623582 1734 ntBASIC6.43□□□□□ -1.38
PTCD1O75127 NACAP2-201ENST00000318548 624 ntBASIC6.43□□□□□ -1.38
PTCD1O75127 RN7SKP145-201ENST00000363291 303 ntBASIC6.43□□□□□ -1.38
PTCD1O75127 RNU6-359P-201ENST00000365466 108 ntBASIC6.43□□□□□ -1.38
PTCD1O75127 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC6.43□□□□□ -1.38
PTCD1O75127 SNRPFP1-201ENST00000414761 252 ntBASIC6.43□□□□□ -1.38
PTCD1O75127 RPS15AP12-201ENST00000419498 388 ntBASIC6.43□□□□□ -1.38
PTCD1O75127 RBM6-203ENST00000421682 684 ntTSL 2 BASIC6.43□□□□□ -1.38
PTCD1O75127 NUP35P1-201ENST00000422734 947 ntBASIC6.43□□□□□ -1.38
PTCD1O75127 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC6.43□□□□□ -1.38
PTCD1O75127 RPL23AP30-201ENST00000432419 501 ntBASIC6.43□□□□□ -1.38
PTCD1O75127 AC016691.1-201ENST00000441321 413 ntBASIC6.43□□□□□ -1.38
PTCD1O75127 RPL7P12-201ENST00000446719 750 ntBASIC6.43□□□□□ -1.38
PTCD1O75127 AC090804.1-201ENST00000448870 490 ntBASIC6.43□□□□□ -1.38
PTCD1O75127 SLC25A18P1-201ENST00000449385 454 ntBASIC6.43□□□□□ -1.38
PTCD1O75127 FGF7P3-201ENST00000454645 303 ntBASIC6.43□□□□□ -1.38
PTCD1O75127 AURKAPS2-201ENST00000454983 333 ntBASIC6.43□□□□□ -1.38
PTCD1O75127 AC010326.1-201ENST00000462726 602 ntBASIC6.43□□□□□ -1.38
PTCD1O75127 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
PTCD1O75127 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC6.43□□□□□ -1.38
PTCD1O75127 AC107934.1-201ENST00000522215 217 ntBASIC6.43□□□□□ -1.38
PTCD1O75127 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms