Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AP001636.2-201ENST00000525517 696 ntBASIC3.34□□□□□ -1.87
HCN1O60741 OR7E13P-201ENST00000526052 910 ntBASIC3.34□□□□□ -1.87
HCN1O60741 OR8I1P-201ENST00000529291 931 ntBASIC3.34□□□□□ -1.87
HCN1O60741 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.34□□□□□ -1.87
HCN1O60741 AC068339.2-201ENST00000534395 618 ntBASIC3.34□□□□□ -1.87
HCN1O60741 AP000619.3-201ENST00000535634 1127 ntBASIC3.34□□□□□ -1.87
HCN1O60741 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.34□□□□□ -1.87
HCN1O60741 AC011602.1-201ENST00000546484 331 ntBASIC3.34□□□□□ -1.87
HCN1O60741 GTF2IP22-201ENST00000554443 182 ntBASIC3.34□□□□□ -1.87
HCN1O60741 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.34□□□□□ -1.87
HCN1O60741 MTCYBP28-201ENST00000566728 1132 ntBASIC3.34□□□□□ -1.87
HCN1O60741 BPTFP1-201ENST00000579209 492 ntBASIC3.34□□□□□ -1.87
HCN1O60741 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.34□□□□□ -1.87
HCN1O60741 AC005014.3-201ENST00000605985 190 ntBASIC3.34□□□□□ -1.87
HCN1O60741 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.34□□□□□ -1.87
HCN1O60741 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HCN1O60741 AC021755.1-201ENST00000559747 1447 ntBASIC3.34□□□□□ -1.88
HCN1O60741 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
HCN1O60741 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
HCN1O60741 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.34□□□□□ -1.88
HCN1O60741 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HCN1O60741 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HCN1O60741 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HCN1O60741 RNU5B-4P-201ENST00000363508 111 ntBASIC3.33□□□□□ -1.88
HCN1O60741 OR1L1-202ENST00000373686 1083 ntBASIC3.33□□□□□ -1.88
HCN1O60741 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HCN1O60741 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HCN1O60741 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HCN1O60741 AL136116.1-201ENST00000403591 381 ntBASIC3.33□□□□□ -1.88
HCN1O60741 SFR1P1-201ENST00000403720 688 ntBASIC3.33□□□□□ -1.88
HCN1O60741 AL024507.1-201ENST00000412741 274 ntBASIC3.33□□□□□ -1.88
HCN1O60741 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.33□□□□□ -1.88
HCN1O60741 MTCYBP24-201ENST00000420387 1106 ntBASIC3.33□□□□□ -1.88
HCN1O60741 HMGN2P31-201ENST00000432430 273 ntBASIC3.33□□□□□ -1.88
HCN1O60741 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.33□□□□□ -1.88
HCN1O60741 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.33□□□□□ -1.88
HCN1O60741 AC010401.1-201ENST00000463867 348 ntBASIC3.33□□□□□ -1.88
HCN1O60741 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.33□□□□□ -1.88
HCN1O60741 RPS4XP22-201ENST00000480755 780 ntBASIC3.33□□□□□ -1.88
HCN1O60741 AC011352.3-201ENST00000505162 593 ntBASIC3.33□□□□□ -1.88
HCN1O60741 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.33□□□□□ -1.88
HCN1O60741 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.33□□□□□ -1.88
HCN1O60741 NDUFB9P3-201ENST00000521269 501 ntBASIC3.33□□□□□ -1.88
HCN1O60741 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.33□□□□□ -1.88
HCN1O60741 AP000926.4-201ENST00000527351 454 ntBASIC3.33□□□□□ -1.88
HCN1O60741 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
HCN1O60741 AC008011.1-201ENST00000545989 227 ntBASIC3.33□□□□□ -1.88
HCN1O60741 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HCN1O60741 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.33□□□□□ -1.88
HCN1O60741 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.33□□□□□ -1.88
HCN1O60741 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.33□□□□□ -1.88
HCN1O60741 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
HCN1O60741 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.33□□□□□ -1.88
HCN1O60741 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.33□□□□□ -1.88
HCN1O60741 AC010591.1-201ENST00000603941 649 ntBASIC3.33□□□□□ -1.88
HCN1O60741 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.33□□□□□ -1.88
HCN1O60741 IGHV3-29-201ENST00000604817 344 ntBASIC3.33□□□□□ -1.88
HCN1O60741 HSPE1P14-201ENST00000605812 302 ntBASIC3.33□□□□□ -1.88
HCN1O60741 AC084757.4-201ENST00000616350 526 ntBASIC3.33□□□□□ -1.88
HCN1O60741 AL109620.1-201ENST00000618738 1197 ntBASIC3.33□□□□□ -1.88
HCN1O60741 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
HCN1O60741 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.33□□□□□ -1.88
HCN1O60741 AC244100.1-202ENST00000621554 382 ntBASIC3.33□□□□□ -1.88
HCN1O60741 AC004777.1-201ENST00000624317 287 ntBASIC3.33□□□□□ -1.88
HCN1O60741 AL138960.2-201ENST00000625145 535 ntBASIC3.33□□□□□ -1.88
HCN1O60741 AC006927.2-201ENST00000639256 389 ntBASIC3.33□□□□□ -1.88
HCN1O60741 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HCN1O60741 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.33□□□□□ -1.88
HCN1O60741 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HCN1O60741 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.33□□□□□ -1.88
HCN1O60741 SGO1P1-201ENST00000603525 1447 ntBASIC3.33□□□□□ -1.88
HCN1O60741 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
HCN1O60741 MTND5P28-201ENST00000438005 1594 ntBASIC3.33□□□□□ -1.88
HCN1O60741 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
HCN1O60741 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
HCN1O60741 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.33□□□□□ -1.88
HCN1O60741 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HCN1O60741 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HCN1O60741 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HCN1O60741 SNORA63.1-201ENST00000362493 131 ntBASIC3.32□□□□□ -1.88
HCN1O60741 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
HCN1O60741 AC234772.1-201ENST00000377927 937 ntBASIC3.32□□□□□ -1.88
HCN1O60741 MIR218-2-201ENST00000385006 110 ntBASIC3.32□□□□□ -1.88
HCN1O60741 MIR16-1-201ENST00000385271 89 ntBASIC3.32□□□□□ -1.88
HCN1O60741 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HCN1O60741 EI24P2-201ENST00000397776 1076 ntBASIC3.32□□□□□ -1.88
HCN1O60741 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
HCN1O60741 AIMP1P1-201ENST00000418670 937 ntBASIC3.32□□□□□ -1.88
HCN1O60741 AC008280.1-201ENST00000418851 412 ntBASIC3.32□□□□□ -1.88
HCN1O60741 AC009237.2-201ENST00000421358 284 ntBASIC3.32□□□□□ -1.88
HCN1O60741 OSTCP5-201ENST00000425293 453 ntBASIC3.32□□□□□ -1.88
HCN1O60741 RPL21P66-201ENST00000426566 466 ntBASIC3.32□□□□□ -1.88
HCN1O60741 RPP40P1-201ENST00000426762 456 ntBASIC3.32□□□□□ -1.88
HCN1O60741 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.32□□□□□ -1.88
HCN1O60741 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.32□□□□□ -1.88
HCN1O60741 AL158071.1-201ENST00000430315 461 ntBASIC3.32□□□□□ -1.88
HCN1O60741 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.32□□□□□ -1.88
HCN1O60741 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.32□□□□□ -1.88
HCN1O60741 AC010655.1-201ENST00000449336 292 ntBASIC3.32□□□□□ -1.88
HCN1O60741 AC073387.1-201ENST00000453261 709 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms