Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.72□□□□□ -1.81
PRKNO60260 MTCO1P14-201ENST00000441695 1559 ntBASIC3.72□□□□□ -1.81
PRKNO60260 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PRKNO60260 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.72□□□□□ -1.81
PRKNO60260 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.72□□□□□ -1.81
PRKNO60260 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
PRKNO60260 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.72□□□□□ -1.81
PRKNO60260 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.72□□□□□ -1.81
PRKNO60260 Y_RNA.201-201ENST00000364052 96 ntBASIC3.72□□□□□ -1.81
PRKNO60260 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.72□□□□□ -1.81
PRKNO60260 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
PRKNO60260 MIR708-201ENST00000390708 88 ntBASIC3.72□□□□□ -1.81
PRKNO60260 SNORA26.8-201ENST00000391306 124 ntBASIC3.72□□□□□ -1.81
PRKNO60260 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PRKNO60260 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.72□□□□□ -1.81
PRKNO60260 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.72□□□□□ -1.81
PRKNO60260 NPM1P11-201ENST00000417106 855 ntBASIC3.72□□□□□ -1.81
PRKNO60260 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.72□□□□□ -1.81
PRKNO60260 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.72□□□□□ -1.81
PRKNO60260 AC010153.1-201ENST00000432862 727 ntBASIC3.72□□□□□ -1.81
PRKNO60260 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.72□□□□□ -1.81
PRKNO60260 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.72□□□□□ -1.81
PRKNO60260 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.72□□□□□ -1.81
PRKNO60260 MTND2P20-201ENST00000440805 661 ntBASIC3.72□□□□□ -1.81
PRKNO60260 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.72□□□□□ -1.81
PRKNO60260 AL360221.1-201ENST00000445989 335 ntBASIC3.72□□□□□ -1.81
PRKNO60260 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.72□□□□□ -1.81
PRKNO60260 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.72□□□□□ -1.81
PRKNO60260 SETP11-201ENST00000473027 690 ntBASIC3.72□□□□□ -1.81
PRKNO60260 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.72□□□□□ -1.81
PRKNO60260 RAP1BP2-201ENST00000478270 544 ntBASIC3.72□□□□□ -1.81
PRKNO60260 VN1R105P-201ENST00000486595 910 ntBASIC3.72□□□□□ -1.81
PRKNO60260 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.72□□□□□ -1.81
PRKNO60260 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.72□□□□□ -1.81
PRKNO60260 AC108078.3-201ENST00000502633 489 ntBASIC3.72□□□□□ -1.81
PRKNO60260 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PRKNO60260 DSTNP2-201ENST00000504533 515 ntBASIC3.72□□□□□ -1.81
PRKNO60260 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.72□□□□□ -1.81
PRKNO60260 MTCYBP43-201ENST00000513621 740 ntBASIC3.72□□□□□ -1.81
PRKNO60260 RNU6-583P-201ENST00000516012 92 ntBASIC3.72□□□□□ -1.81
PRKNO60260 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.72□□□□□ -1.81
PRKNO60260 NDUFA5P2-201ENST00000519723 344 ntBASIC3.72□□□□□ -1.81
PRKNO60260 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.72□□□□□ -1.81
PRKNO60260 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PRKNO60260 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.72□□□□□ -1.81
PRKNO60260 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.72□□□□□ -1.81
PRKNO60260 OR7K1P-201ENST00000546439 926 ntBASIC3.72□□□□□ -1.81
PRKNO60260 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.72□□□□□ -1.81
PRKNO60260 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.72□□□□□ -1.81
PRKNO60260 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.72□□□□□ -1.81
PRKNO60260 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.72□□□□□ -1.81
PRKNO60260 AC107982.3-201ENST00000584957 985 ntBASIC3.72□□□□□ -1.81
PRKNO60260 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.72□□□□□ -1.81
PRKNO60260 AC022916.3-201ENST00000592961 742 ntBASIC3.72□□□□□ -1.81
PRKNO60260 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.72□□□□□ -1.81
PRKNO60260 AL031985.2-201ENST00000600955 480 ntBASIC3.72□□□□□ -1.81
PRKNO60260 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.72□□□□□ -1.81
PRKNO60260 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
PRKNO60260 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.72□□□□□ -1.81
PRKNO60260 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.72□□□□□ -1.81
PRKNO60260 AC008785.1-201ENST00000624475 456 ntBASIC3.72□□□□□ -1.81
PRKNO60260 AC092192.1-201ENST00000633154 1018 ntBASIC3.72□□□□□ -1.81
PRKNO60260 AL773545.4-201ENST00000637262 310 ntBASIC3.72□□□□□ -1.81
PRKNO60260 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.72□□□□□ -1.81
PRKNO60260 AL513478.4-201ENST00000641636 310 ntBASIC3.72□□□□□ -1.81
PRKNO60260 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.72□□□□□ -1.81
PRKNO60260 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
PRKNO60260 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PRKNO60260 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.72□□□□□ -1.81
PRKNO60260 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
PRKNO60260 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.72□□□□□ -1.81
PRKNO60260 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PRKNO60260 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.72□□□□□ -1.81
PRKNO60260 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PRKNO60260 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.81
PRKNO60260 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.71□□□□□ -1.82
PRKNO60260 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PRKNO60260 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
PRKNO60260 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.71□□□□□ -1.82
PRKNO60260 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
PRKNO60260 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.71□□□□□ -1.82
PRKNO60260 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PRKNO60260 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PRKNO60260 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
PRKNO60260 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
PRKNO60260 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PRKNO60260 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PRKNO60260 SNRPEP3-201ENST00000338402 276 ntBASIC3.71□□□□□ -1.82
PRKNO60260 RNU6-500P-201ENST00000362349 107 ntBASIC3.71□□□□□ -1.82
PRKNO60260 RNA5SP399-201ENST00000364003 117 ntBASIC3.71□□□□□ -1.82
PRKNO60260 RNU6-374P-201ENST00000364146 108 ntBASIC3.71□□□□□ -1.82
PRKNO60260 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.71□□□□□ -1.82
PRKNO60260 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.71□□□□□ -1.82
PRKNO60260 RNU6-921P-201ENST00000384361 107 ntBASIC3.71□□□□□ -1.82
PRKNO60260 MIR506-201ENST00000384998 124 ntBASIC3.71□□□□□ -1.82
PRKNO60260 SNRPEP2-201ENST00000397592 279 ntBASIC3.71□□□□□ -1.82
PRKNO60260 LAP3P1-201ENST00000403648 294 ntBASIC3.71□□□□□ -1.82
PRKNO60260 TPMTP3-201ENST00000411928 735 ntBASIC3.71□□□□□ -1.82
PRKNO60260 RPL7P8-201ENST00000411964 730 ntBASIC3.71□□□□□ -1.82
PRKNO60260 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms