Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 AC098799.2-201ENST00000509466 868 ntBASIC2.61□□□□□ -1.99
SSNA1O43805 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.61□□□□□ -1.99
SSNA1O43805 AC026412.2-201ENST00000512270 1075 ntBASIC2.61□□□□□ -1.99
SSNA1O43805 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.61□□□□□ -1.99
SSNA1O43805 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.61□□□□□ -1.99
SSNA1O43805 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.61□□□□□ -1.99
SSNA1O43805 AC125611.2-201ENST00000551907 647 ntBASIC2.61□□□□□ -1.99
SSNA1O43805 AC090666.1-201ENST00000578241 445 ntBASIC2.61□□□□□ -1.99
SSNA1O43805 AC091057.2-201ENST00000602594 792 ntBASIC2.61□□□□□ -1.99
SSNA1O43805 AC009220.3-201ENST00000604318 586 ntBASIC2.61□□□□□ -1.99
SSNA1O43805 AP001330.4-201ENST00000604350 154 ntBASIC2.61□□□□□ -1.99
SSNA1O43805 AL162713.1-201ENST00000604480 262 ntBASIC2.61□□□□□ -1.99
SSNA1O43805 AC106791.2-201ENST00000604680 391 ntBASIC2.61□□□□□ -1.99
SSNA1O43805 uc_338.25-201ENST00000613756 156 ntBASIC2.61□□□□□ -1.99
SSNA1O43805 AL355810.1-201ENST00000614629 552 ntBASIC2.61□□□□□ -1.99
SSNA1O43805 ASNSP3-201ENST00000451989 1306 ntBASIC2.61□□□□□ -1.99
SSNA1O43805 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.61□□□□□ -1.99
SSNA1O43805 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
SSNA1O43805 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SSNA1O43805 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SSNA1O43805 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SSNA1O43805 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SSNA1O43805 SNORA51.1-201ENST00000363243 140 ntBASIC2.6□□□□□ -1.99
SSNA1O43805 RNA5SP51-201ENST00000364750 119 ntBASIC2.6□□□□□ -1.99
SSNA1O43805 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.6□□□□□ -1.99
SSNA1O43805 AC068538.1-201ENST00000376856 336 ntBASIC2.6□□□□□ -1.99
SSNA1O43805 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.6□□□□□ -1.99
SSNA1O43805 RNU6-40P-201ENST00000384254 107 ntBASIC2.6□□□□□ -1.99
SSNA1O43805 RN7SKP111-201ENST00000410349 271 ntBASIC2.6□□□□□ -1.99
SSNA1O43805 RNA5SP492-201ENST00000411330 114 ntBASIC2.6□□□□□ -1.99
SSNA1O43805 BX510359.3-201ENST00000422168 306 ntBASIC2.6□□□□□ -1.99
SSNA1O43805 DUTP6-201ENST00000425573 462 ntBASIC2.6□□□□□ -1.99
SSNA1O43805 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.6□□□□□ -1.99
SSNA1O43805 AC010881.1-201ENST00000433830 235 ntBASIC2.6□□□□□ -1.99
SSNA1O43805 AL645638.1-201ENST00000440519 361 ntBASIC2.6□□□□□ -1.99
SSNA1O43805 AL513321.1-201ENST00000441175 761 ntBASIC2.6□□□□□ -1.99
SSNA1O43805 NOTCH2P1-201ENST00000443481 624 ntBASIC2.6□□□□□ -1.99
SSNA1O43805 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.6□□□□□ -1.99
SSNA1O43805 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.6□□□□□ -1.99
SSNA1O43805 OR6K1P-201ENST00000456766 971 ntBASIC2.6□□□□□ -1.99
SSNA1O43805 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.6□□□□□ -1.99
SSNA1O43805 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC2.6□□□□□ -1.99
SSNA1O43805 SNORD105B-201ENST00000458770 79 ntBASIC2.6□□□□□ -1.99
SSNA1O43805 RPS29P12-201ENST00000460178 152 ntBASIC2.6□□□□□ -1.99
SSNA1O43805 RPS7P7-201ENST00000463499 571 ntBASIC2.6□□□□□ -1.99
SSNA1O43805 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC2.6□□□□□ -1.99
SSNA1O43805 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SSNA1O43805 RPS4XP14-201ENST00000493072 781 ntBASIC2.6□□□□□ -1.99
SSNA1O43805 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC2.6□□□□□ -1.99
SSNA1O43805 AC010460.1-201ENST00000507087 466 ntBASIC2.6□□□□□ -1.99
SSNA1O43805 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC2.6□□□□□ -1.99
SSNA1O43805 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.6□□□□□ -1.99
SSNA1O43805 TRMT10BP1-201ENST00000519377 943 ntBASIC2.6□□□□□ -1.99
SSNA1O43805 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.6□□□□□ -1.99
SSNA1O43805 OR5G4P-201ENST00000525251 760 ntBASIC2.6□□□□□ -1.99
SSNA1O43805 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC2.6□□□□□ -1.99
SSNA1O43805 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.6□□□□□ -1.99
SSNA1O43805 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.6□□□□□ -1.99
SSNA1O43805 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.6□□□□□ -1.99
SSNA1O43805 DUXAP4-201ENST00000603046 613 ntBASIC2.6□□□□□ -1.99
SSNA1O43805 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.6□□□□□ -1.99
SSNA1O43805 AC009570.1-201ENST00000609599 745 ntBASIC2.6□□□□□ -1.99
SSNA1O43805 AC090116.1-201ENST00000615679 446 ntBASIC2.6□□□□□ -1.99
SSNA1O43805 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
SSNA1O43805 Z99129.2-201ENST00000619967 314 ntBASIC2.6□□□□□ -1.99
SSNA1O43805 AC006249.1-201ENST00000621223 471 ntBASIC2.6□□□□□ -1.99
SSNA1O43805 AP003122.6-201ENST00000623831 495 ntBASIC2.6□□□□□ -1.99
SSNA1O43805 AC017104.5-201ENST00000637647 639 ntBASIC2.6□□□□□ -1.99
SSNA1O43805 MIR492-201ENST00000638676 116 ntBASIC2.6□□□□□ -1.99
SSNA1O43805 GABRG2-229ENST00000641017 3628 ntBASIC2.6□□□□□ -1.99
SSNA1O43805 SGO1P2-201ENST00000429458 1589 ntBASIC2.6□□□□□ -1.99
SSNA1O43805 AC046144.1-201ENST00000478559 1853 ntBASIC2.6□□□□□ -1.99
SSNA1O43805 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SSNA1O43805 AC011460.1-201ENST00000636268 1834 ntBASIC2.59□□□□□ -1.99
SSNA1O43805 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.59□□□□□ -1.99
SSNA1O43805 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.59□□□□□ -1.99
SSNA1O43805 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
SSNA1O43805 OR5H2-201ENST00000355273 945 ntBASIC2.59□□□□□ -1.99
SSNA1O43805 RNU6-1027P-201ENST00000383998 107 ntBASIC2.59□□□□□ -1.99
SSNA1O43805 RNA5SP252-201ENST00000391131 119 ntBASIC2.59□□□□□ -1.99
SSNA1O43805 RPL21P75-201ENST00000396599 483 ntBASIC2.59□□□□□ -1.99
SSNA1O43805 RPL21P28-201ENST00000401418 483 ntBASIC2.59□□□□□ -1.99
SSNA1O43805 AL592114.1-201ENST00000403842 483 ntBASIC2.59□□□□□ -1.99
SSNA1O43805 AL590004.2-201ENST00000404787 371 ntBASIC2.59□□□□□ -1.99
SSNA1O43805 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.59□□□□□ -1.99
SSNA1O43805 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.59□□□□□ -1.99
SSNA1O43805 ATG3P1-201ENST00000419507 911 ntBASIC2.59□□□□□ -1.99
SSNA1O43805 RPL21P32-201ENST00000419877 477 ntBASIC2.59□□□□□ -1.99
SSNA1O43805 FNDC3CP-201ENST00000420795 1155 ntBASIC2.59□□□□□ -1.99
SSNA1O43805 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.59□□□□□ -1.99
SSNA1O43805 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC2.59□□□□□ -1.99
SSNA1O43805 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.59□□□□□ -1.99
SSNA1O43805 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC2.59□□□□□ -1.99
SSNA1O43805 AL031183.1-201ENST00000457667 207 ntBASIC2.59□□□□□ -1.99
SSNA1O43805 RPL21P39-201ENST00000463605 483 ntBASIC2.59□□□□□ -1.99
SSNA1O43805 PRDX3P4-201ENST00000470828 747 ntBASIC2.59□□□□□ -1.99
SSNA1O43805 AC011979.1-201ENST00000472300 483 ntBASIC2.59□□□□□ -1.99
SSNA1O43805 RPL21P93-201ENST00000480465 489 ntBASIC2.59□□□□□ -1.99
SSNA1O43805 AC233702.1-201ENST00000482905 502 ntBASIC2.59□□□□□ -1.99
SSNA1O43805 AC087190.1-201ENST00000484462 480 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms