Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AP005137.2-201ENST00000609238 400 ntBASIC4.23□□□□□ -1.73
SMAD6O43541 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.23□□□□□ -1.73
SMAD6O43541 AC025594.3-201ENST00000613068 790 ntBASIC4.23□□□□□ -1.73
SMAD6O43541 C2orf27A-204ENST00000623058 969 ntBASIC4.23□□□□□ -1.73
SMAD6O43541 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SMAD6O43541 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SMAD6O43541 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SMAD6O43541 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.23□□□□□ -1.73
SMAD6O43541 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
SMAD6O43541 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.23□□□□□ -1.73
SMAD6O43541 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SMAD6O43541 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SMAD6O43541 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SMAD6O43541 AC092447.7-201ENST00000422212 1621 ntBASIC4.22□□□□□ -1.73
SMAD6O43541 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SMAD6O43541 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SMAD6O43541 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SMAD6O43541 SPRR2C-201ENST00000290702 219 ntBASIC4.22□□□□□ -1.73
SMAD6O43541 RNU6-694P-201ENST00000364071 147 ntBASIC4.22□□□□□ -1.73
SMAD6O43541 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
SMAD6O43541 RNU6-244P-201ENST00000391028 104 ntBASIC4.22□□□□□ -1.73
SMAD6O43541 MIR1193-201ENST00000408109 78 ntBASIC4.22□□□□□ -1.73
SMAD6O43541 MIR1179-201ENST00000408703 91 ntBASIC4.22□□□□□ -1.73
SMAD6O43541 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.22□□□□□ -1.73
SMAD6O43541 RNU6-575P-201ENST00000411326 105 ntBASIC4.22□□□□□ -1.73
SMAD6O43541 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.22□□□□□ -1.73
SMAD6O43541 AL160275.2-201ENST00000412010 394 ntBASIC4.22□□□□□ -1.73
SMAD6O43541 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.22□□□□□ -1.73
SMAD6O43541 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.22□□□□□ -1.73
SMAD6O43541 Z99497.1-201ENST00000421282 135 ntBASIC4.22□□□□□ -1.73
SMAD6O43541 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.22□□□□□ -1.73
SMAD6O43541 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.22□□□□□ -1.73
SMAD6O43541 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.22□□□□□ -1.73
SMAD6O43541 AC006011.1-201ENST00000442758 349 ntBASIC4.22□□□□□ -1.73
SMAD6O43541 RPS26P30-201ENST00000443431 335 ntBASIC4.22□□□□□ -1.73
SMAD6O43541 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.22□□□□□ -1.73
SMAD6O43541 SNRPGP9-201ENST00000456025 225 ntBASIC4.22□□□□□ -1.73
SMAD6O43541 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.22□□□□□ -1.73
SMAD6O43541 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.22□□□□□ -1.73
SMAD6O43541 AC138853.1-201ENST00000503549 823 ntBASIC4.22□□□□□ -1.73
SMAD6O43541 AC116353.2-201ENST00000505332 712 ntBASIC4.22□□□□□ -1.73
SMAD6O43541 MTND2P33-201ENST00000506452 1031 ntBASIC4.22□□□□□ -1.73
SMAD6O43541 RPL37P25-201ENST00000507308 276 ntBASIC4.22□□□□□ -1.73
SMAD6O43541 AC020593.1-201ENST00000507399 299 ntBASIC4.22□□□□□ -1.73
SMAD6O43541 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.22□□□□□ -1.73
SMAD6O43541 AC109445.1-201ENST00000512356 383 ntBASIC4.22□□□□□ -1.73
SMAD6O43541 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.22□□□□□ -1.73
SMAD6O43541 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.22□□□□□ -1.73
SMAD6O43541 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.22□□□□□ -1.73
SMAD6O43541 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.22□□□□□ -1.73
SMAD6O43541 CBX3P5-201ENST00000552017 521 ntBASIC4.22□□□□□ -1.73
SMAD6O43541 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.22□□□□□ -1.73
SMAD6O43541 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.22□□□□□ -1.73
SMAD6O43541 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SMAD6O43541 AL109618.2-201ENST00000605527 211 ntBASIC4.22□□□□□ -1.73
SMAD6O43541 AC092354.1-201ENST00000606057 376 ntBASIC4.22□□□□□ -1.73
SMAD6O43541 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.22□□□□□ -1.73
SMAD6O43541 uc_338.32-201ENST00000615087 172 ntBASIC4.22□□□□□ -1.73
SMAD6O43541 MIR7151-201ENST00000617477 60 ntBASIC4.22□□□□□ -1.73
SMAD6O43541 AL713922.2-201ENST00000619384 716 ntBASIC4.22□□□□□ -1.73
SMAD6O43541 AC112484.5-201ENST00000624189 228 ntBASIC4.22□□□□□ -1.73
SMAD6O43541 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SMAD6O43541 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SMAD6O43541 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SMAD6O43541 AC087190.4-201ENST00000574616 8334 ntBASIC4.21□□□□□ -1.73
SMAD6O43541 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
SMAD6O43541 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
SMAD6O43541 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SMAD6O43541 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SMAD6O43541 AL356967.1-201ENST00000406305 431 ntBASIC4.21□□□□□ -1.74
SMAD6O43541 MIR548F1-201ENST00000408667 84 ntBASIC4.21□□□□□ -1.74
SMAD6O43541 RNU2-66P-201ENST00000410650 161 ntBASIC4.21□□□□□ -1.74
SMAD6O43541 AC114814.2-201ENST00000419195 485 ntBASIC4.21□□□□□ -1.74
SMAD6O43541 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.21□□□□□ -1.74
SMAD6O43541 CYCSP46-201ENST00000423569 204 ntBASIC4.21□□□□□ -1.74
SMAD6O43541 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.21□□□□□ -1.74
SMAD6O43541 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.21□□□□□ -1.74
SMAD6O43541 HMGB1P45-201ENST00000435986 653 ntBASIC4.21□□□□□ -1.74
SMAD6O43541 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.21□□□□□ -1.74
SMAD6O43541 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.21□□□□□ -1.74
SMAD6O43541 RPL23AP46-201ENST00000438548 490 ntBASIC4.21□□□□□ -1.74
SMAD6O43541 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.21□□□□□ -1.74
SMAD6O43541 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.21□□□□□ -1.74
SMAD6O43541 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.21□□□□□ -1.74
SMAD6O43541 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.21□□□□□ -1.74
SMAD6O43541 HMGB1P16-201ENST00000447155 540 ntBASIC4.21□□□□□ -1.74
SMAD6O43541 ST13P20-201ENST00000447996 1065 ntBASIC4.21□□□□□ -1.74
SMAD6O43541 RPL36AP33-201ENST00000450395 310 ntBASIC4.21□□□□□ -1.74
SMAD6O43541 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.21□□□□□ -1.74
SMAD6O43541 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.21□□□□□ -1.74
SMAD6O43541 AC116337.2-201ENST00000477662 156 ntBASIC4.21□□□□□ -1.74
SMAD6O43541 RN7SL604P-201ENST00000492589 296 ntBASIC4.21□□□□□ -1.74
SMAD6O43541 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.21□□□□□ -1.74
SMAD6O43541 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
SMAD6O43541 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.21□□□□□ -1.74
SMAD6O43541 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.21□□□□□ -1.74
SMAD6O43541 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.21□□□□□ -1.74
SMAD6O43541 AP003392.2-201ENST00000527269 208 ntBASIC4.21□□□□□ -1.74
SMAD6O43541 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.21□□□□□ -1.74
SMAD6O43541 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms