Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AL513302.2-201ENST00000562313 1842 ntBASIC3.71□□□□□ -1.82
CLDN3O15551 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN3O15551 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN3O15551 RNVU1-3-201ENST00000364313 161 ntBASIC3.7□□□□□ -1.82
CLDN3O15551 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN3O15551 SFR1P1-201ENST00000403720 688 ntBASIC3.7□□□□□ -1.82
CLDN3O15551 Z99755.1-201ENST00000414048 380 ntBASIC3.7□□□□□ -1.82
CLDN3O15551 TOMM22P1-201ENST00000418578 312 ntBASIC3.7□□□□□ -1.82
CLDN3O15551 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.7□□□□□ -1.82
CLDN3O15551 UBE2D3P3-201ENST00000426992 425 ntBASIC3.7□□□□□ -1.82
CLDN3O15551 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.7□□□□□ -1.82
CLDN3O15551 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.7□□□□□ -1.82
CLDN3O15551 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.7□□□□□ -1.82
CLDN3O15551 RPL7P59-201ENST00000447700 943 ntBASIC3.7□□□□□ -1.82
CLDN3O15551 OR51B8P-201ENST00000449892 769 ntBASIC3.7□□□□□ -1.82
CLDN3O15551 Z99714.1-201ENST00000450463 807 ntBASIC3.7□□□□□ -1.82
CLDN3O15551 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.7□□□□□ -1.82
CLDN3O15551 NF1P3-201ENST00000457709 450 ntBASIC3.7□□□□□ -1.82
CLDN3O15551 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.7□□□□□ -1.82
CLDN3O15551 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN3O15551 AL049830.2-201ENST00000480072 201 ntBASIC3.7□□□□□ -1.82
CLDN3O15551 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.7□□□□□ -1.82
CLDN3O15551 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN3O15551 AC112198.1-201ENST00000505369 1220 ntBASIC3.7□□□□□ -1.82
CLDN3O15551 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.7□□□□□ -1.82
CLDN3O15551 AC074250.1-201ENST00000511117 192 ntBASIC3.7□□□□□ -1.82
CLDN3O15551 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.7□□□□□ -1.82
CLDN3O15551 AC119751.1-201ENST00000513357 765 ntBASIC3.7□□□□□ -1.82
CLDN3O15551 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN3O15551 AP001207.1-201ENST00000524051 481 ntBASIC3.7□□□□□ -1.82
CLDN3O15551 AP004371.1-201ENST00000525240 214 ntBASIC3.7□□□□□ -1.82
CLDN3O15551 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.7□□□□□ -1.82
CLDN3O15551 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.7□□□□□ -1.82
CLDN3O15551 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.7□□□□□ -1.82
CLDN3O15551 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.7□□□□□ -1.82
CLDN3O15551 TGIF1P1-201ENST00000558095 802 ntBASIC3.7□□□□□ -1.82
CLDN3O15551 MTCO1P40-201ENST00000574371 625 ntBASIC3.7□□□□□ -1.82
CLDN3O15551 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.7□□□□□ -1.82
CLDN3O15551 AC005412.1-201ENST00000580812 1049 ntBASIC3.7□□□□□ -1.82
CLDN3O15551 AL365503.1-201ENST00000605247 905 ntBASIC3.7□□□□□ -1.82
CLDN3O15551 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.7□□□□□ -1.82
CLDN3O15551 AL513477.2-201ENST00000607858 568 ntBASIC3.7□□□□□ -1.82
CLDN3O15551 AC127502.3-201ENST00000636170 1206 ntBASIC3.7□□□□□ -1.82
CLDN3O15551 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.7□□□□□ -1.82
CLDN3O15551 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN3O15551 MTND5P31-201ENST00000419366 1374 ntBASIC3.7□□□□□ -1.82
CLDN3O15551 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN3O15551 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
CLDN3O15551 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN3O15551 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN3O15551 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN3O15551 AL356274.2-201ENST00000624379 3752 ntBASIC3.7□□□□□ -1.82
CLDN3O15551 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.7□□□□□ -1.82
CLDN3O15551 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.7□□□□□ -1.82
CLDN3O15551 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN3O15551 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.7□□□□□ -1.82
CLDN3O15551 SGO1P1-201ENST00000603525 1447 ntBASIC3.7□□□□□ -1.82
CLDN3O15551 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLDN3O15551 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.69□□□□□ -1.82
CLDN3O15551 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLDN3O15551 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CLDN3O15551 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CLDN3O15551 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CLDN3O15551 MIR30E-201ENST00000362104 92 ntBASIC3.69□□□□□ -1.82
CLDN3O15551 U6.112-201ENST00000384129 70 ntBASIC3.69□□□□□ -1.82
CLDN3O15551 MIR16-1-201ENST00000385271 89 ntBASIC3.69□□□□□ -1.82
CLDN3O15551 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.69□□□□□ -1.82
CLDN3O15551 MTCO3P31-201ENST00000405526 789 ntBASIC3.69□□□□□ -1.82
CLDN3O15551 RNA5SP44-201ENST00000410446 133 ntBASIC3.69□□□□□ -1.82
CLDN3O15551 USP9YP19-201ENST00000412165 485 ntBASIC3.69□□□□□ -1.82
CLDN3O15551 OFD1P18Y-201ENST00000420889 959 ntBASIC3.69□□□□□ -1.82
CLDN3O15551 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.69□□□□□ -1.82
CLDN3O15551 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.69□□□□□ -1.82
CLDN3O15551 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CLDN3O15551 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.69□□□□□ -1.82
CLDN3O15551 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.69□□□□□ -1.82
CLDN3O15551 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.69□□□□□ -1.82
CLDN3O15551 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.69□□□□□ -1.82
CLDN3O15551 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.69□□□□□ -1.82
CLDN3O15551 AL139174.1-201ENST00000531489 886 ntBASIC3.69□□□□□ -1.82
CLDN3O15551 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.69□□□□□ -1.82
CLDN3O15551 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.69□□□□□ -1.82
CLDN3O15551 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.69□□□□□ -1.82
CLDN3O15551 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.69□□□□□ -1.82
CLDN3O15551 AC133794.1-201ENST00000602731 914 ntBASIC3.69□□□□□ -1.82
CLDN3O15551 AC092474.3-201ENST00000603022 568 ntBASIC3.69□□□□□ -1.82
CLDN3O15551 SRGNP1-201ENST00000603392 451 ntBASIC3.69□□□□□ -1.82
CLDN3O15551 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.69□□□□□ -1.82
CLDN3O15551 AL354976.1-201ENST00000613843 387 ntBASIC3.69□□□□□ -1.82
CLDN3O15551 AC068722.2-201ENST00000618734 544 ntBASIC3.69□□□□□ -1.82
CLDN3O15551 AC098679.5-201ENST00000624394 571 ntBASIC3.69□□□□□ -1.82
CLDN3O15551 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.69□□□□□ -1.82
CLDN3O15551 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.69□□□□□ -1.82
CLDN3O15551 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLDN3O15551 TNPO1P3-201ENST00000436471 2662 ntBASIC3.69□□□□□ -1.82
CLDN3O15551 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.69□□□□□ -1.82
CLDN3O15551 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.69□□□□□ -1.82
CLDN3O15551 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CLDN3O15551 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CLDN3O15551 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms