Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 AL158053.1-201ENST00000441503 453 ntBASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 RPL34P26-201ENST00000445636 354 ntBASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 MTND2P39-201ENST00000457230 764 ntBASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC092185.1-201ENST00000491371 97 ntBASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 AL035404.1-201ENST00000497982 568 ntBASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 SCARNA20.6-201ENST00000517251 106 ntBASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC019227.1-201ENST00000526902 510 ntBASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC006504.3-201ENST00000586818 523 ntBASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC125494.3-201ENST00000602759 455 ntBASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 AL157817.1-201ENST00000614264 790 ntBASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC017071.1-201ENST00000564407 2204 ntBASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 RNA5SP374-201ENST00000362939 125 ntBASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 RNU1-140P-201ENST00000365040 165 ntBASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 RNU6-481P-201ENST00000384194 107 ntBASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 HMGB1P10-201ENST00000395823 563 ntBASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 AL138885.1-201ENST00000405921 675 ntBASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 AL583834.1-201ENST00000406943 343 ntBASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 BX664727.1-201ENST00000416024 466 ntBASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 AL138799.3-201ENST00000438968 350 ntBASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 MOB1AP2-201ENST00000446060 614 ntBASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 Z75741.1-201ENST00000446793 314 ntBASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 AL671855.1-201ENST00000446875 1203 ntBASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC097262.1-201ENST00000452559 548 ntBASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC010627.1-201ENST00000503819 1294 ntBASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC010265.1-201ENST00000513509 211 ntBASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 RNU1-143P-201ENST00000516296 146 ntBASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 RNU6-334P-201ENST00000517072 102 ntBASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 RNA5SP380-201ENST00000517190 98 ntBASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 AP002404.1-201ENST00000532005 451 ntBASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 AP004242.1-201ENST00000533701 349 ntBASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC006270.2-201ENST00000578523 652 ntBASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC015917.1-201ENST00000579654 510 ntBASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 U1.23-201ENST00000610293 146 ntBASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 AL354976.1-201ENST00000613843 387 ntBASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 VN1R9P-201ENST00000614184 867 ntBASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 RNU1-68P-201ENST00000615382 146 ntBASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 U1.39-201ENST00000621562 146 ntBASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
TMX2-CTNND1H3BSU7 CR383658.2-201ENST00000547576 1525 ntBASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 RPL7P26-201ENST00000333817 754 ntBASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 MIR422A-201ENST00000362286 90 ntBASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 RNU6-543P-201ENST00000362576 108 ntBASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 SNORD56.4-201ENST00000363883 71 ntBASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 RNU6-452P-201ENST00000384406 107 ntBASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 GSTA8P-201ENST00000404253 637 ntBASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 RNA5SP498-201ENST00000411342 120 ntBASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 HMGB3P31-201ENST00000413333 595 ntBASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 TATDN1P1-201ENST00000414123 891 ntBASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC245291.1-201ENST00000419501 328 ntBASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC005189.1-201ENST00000431286 310 ntBASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 PTP4A1P3-201ENST00000433661 420 ntBASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 HMGN1P5-201ENST00000448591 263 ntBASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 RPL37P3-201ENST00000456825 293 ntBASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC021205.1-201ENST00000468797 348 ntBASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 RPL21P47-201ENST00000483696 477 ntBASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC005912.1-201ENST00000495392 255 ntBASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 FABP5P12-201ENST00000515543 389 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms