Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.45□□□□□ -1.86
NPIPA2E9PIF3 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.45□□□□□ -1.86
NPIPA2E9PIF3 AL389895.1-201ENST00000554127 252 ntBASIC3.45□□□□□ -1.86
NPIPA2E9PIF3 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NPIPA2E9PIF3 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.45□□□□□ -1.86
NPIPA2E9PIF3 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.45□□□□□ -1.86
NPIPA2E9PIF3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.45□□□□□ -1.86
NPIPA2E9PIF3 MIR4666A-201ENST00000580160 79 ntBASIC3.45□□□□□ -1.86
NPIPA2E9PIF3 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.45□□□□□ -1.86
NPIPA2E9PIF3 AL669831.4-202ENST00000590817 238 ntBASIC3.45□□□□□ -1.86
NPIPA2E9PIF3 AC011468.4-201ENST00000603942 409 ntBASIC3.45□□□□□ -1.86
NPIPA2E9PIF3 AC025588.3-201ENST00000604182 274 ntBASIC3.45□□□□□ -1.86
NPIPA2E9PIF3 DPRXP5-201ENST00000604662 539 ntBASIC3.45□□□□□ -1.86
NPIPA2E9PIF3 AC112220.2-201ENST00000605513 533 ntBASIC3.45□□□□□ -1.86
NPIPA2E9PIF3 AC087821.2-201ENST00000637086 450 ntBASIC3.45□□□□□ -1.86
NPIPA2E9PIF3 AC024560.2-201ENST00000507981 1497 ntBASIC3.45□□□□□ -1.86
NPIPA2E9PIF3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NPIPA2E9PIF3 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 RPS4XP5-202ENST00000449995 1334 ntBASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 AC091286.1-201ENST00000431233 461 ntBASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 HSFY7P-201ENST00000432672 318 ntBASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 HSFY8P-201ENST00000437934 318 ntBASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 AL356535.1-201ENST00000440335 398 ntBASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 HSFY5P-201ENST00000453726 309 ntBASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 AL133162.1-201ENST00000463228 453 ntBASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 RPL7P49-201ENST00000471402 708 ntBASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 MTCO3P44-201ENST00000510977 541 ntBASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 AC091163.3-201ENST00000518269 1144 ntBASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 AC026403.1-201ENST00000518938 295 ntBASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 AP004371.1-201ENST00000525240 214 ntBASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 AP000790.1-201ENST00000528891 737 ntBASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 LRRC6P1-201ENST00000532188 885 ntBASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 PDCL2P2-201ENST00000533651 189 ntBASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 GAS5-AS1-201ENST00000602767 694 ntBASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 AC069431.2-201ENST00000604149 1099 ntBASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 AC092953.2-201ENST00000608000 699 ntBASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 AL391834.2-201ENST00000609982 546 ntBASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 AL592148.2-201ENST00000612210 372 ntBASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 AL445984.1-201ENST00000637834 659 ntBASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 AC009093.8-201ENST00000641769 292 ntBASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
NPIPA2E9PIF3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 TNPO1P3-201ENST00000436471 2662 ntBASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 SNORD46.1-201ENST00000364139 104 ntBASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 RNVU1-3-201ENST00000364313 161 ntBASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 MIR217-201ENST00000384817 110 ntBASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 MIR199A2-201ENST00000385289 110 ntBASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 RPL31P1-201ENST00000398116 372 ntBASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 AL023807.1-201ENST00000407932 359 ntBASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 CRYBB2P1-203ENST00000415709 538 ntBASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 BOLA3P4-201ENST00000418151 400 ntBASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 Z93242.1-201ENST00000427102 353 ntBASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 USP12PY-201ENST00000427677 1064 ntBASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 RPL31P54-201ENST00000429803 370 ntBASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 AC005345.1-201ENST00000431868 217 ntBASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.43□□□□□ -1.86
NPIPA2E9PIF3 SETP5-201ENST00000437270 562 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms