Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 AC116562.4-201ENST00000641316 2276 ntBASIC18.48■□□□□ 0.55
SLC6A20Q9NP91 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC6A20Q9NP91 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.48■□□□□ 0.55
SLC6A20Q9NP91 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SLC6A20Q9NP91 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC6A20Q9NP91 FSCN1P1-201ENST00000568912 1481 ntBASIC18.48■□□□□ 0.55
SLC6A20Q9NP91 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC6A20Q9NP91 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SLC6A20Q9NP91 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.48■□□□□ 0.55
SLC6A20Q9NP91 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC6A20Q9NP91 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.48■□□□□ 0.55
SLC6A20Q9NP91 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.48■□□□□ 0.55
SLC6A20Q9NP91 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.48■□□□□ 0.55
SLC6A20Q9NP91 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SLC6A20Q9NP91 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC6A20Q9NP91 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC6A20Q9NP91 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC6A20Q9NP91 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC6A20Q9NP91 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC6A20Q9NP91 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC6A20Q9NP91 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC6A20Q9NP91 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC6A20Q9NP91 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC6A20Q9NP91 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC6A20Q9NP91 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC6A20Q9NP91 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.47■□□□□ 0.55
SLC6A20Q9NP91 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC6A20Q9NP91 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC6A20Q9NP91 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC6A20Q9NP91 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC6A20Q9NP91 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC6A20Q9NP91 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC6A20Q9NP91 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC6A20Q9NP91 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.47■□□□□ 0.55
SLC6A20Q9NP91 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.47■□□□□ 0.55
SLC6A20Q9NP91 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.47■□□□□ 0.55
SLC6A20Q9NP91 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.47■□□□□ 0.55
SLC6A20Q9NP91 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.47■□□□□ 0.55
SLC6A20Q9NP91 AC130371.2-201ENST00000619443 611 ntBASIC18.47■□□□□ 0.55
SLC6A20Q9NP91 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SLC6A20Q9NP91 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SLC6A20Q9NP91 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC6A20Q9NP91 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SLC6A20Q9NP91 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC6A20Q9NP91 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC6A20Q9NP91 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC6A20Q9NP91 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC6A20Q9NP91 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC6A20Q9NP91 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 RBM17P1-201ENST00000453646 1190 ntBASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 LINC01023-201ENST00000606054 436 ntBASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC6A20Q9NP91 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
SLC6A20Q9NP91 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC6A20Q9NP91 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SLC6A20Q9NP91 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SLC6A20Q9NP91 AL032819.2-201ENST00000624543 2162 ntBASIC18.45■□□□□ 0.54
SLC6A20Q9NP91 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC6A20Q9NP91 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC6A20Q9NP91 TEX21P-204ENST00000641479 1693 ntBASIC18.45■□□□□ 0.54
SLC6A20Q9NP91 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC6A20Q9NP91 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SLC6A20Q9NP91 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC6A20Q9NP91 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.45■□□□□ 0.54
SLC6A20Q9NP91 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.45■□□□□ 0.54
SLC6A20Q9NP91 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SLC6A20Q9NP91 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SLC6A20Q9NP91 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC6A20Q9NP91 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms