Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.54■□□□□ 0.72
COL25A1Q9BXS0 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL25A1Q9BXS0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL25A1Q9BXS0 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL25A1Q9BXS0 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.54■□□□□ 0.72
COL25A1Q9BXS0 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL25A1Q9BXS0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL25A1Q9BXS0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.54■□□□□ 0.72
COL25A1Q9BXS0 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL25A1Q9BXS0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL25A1Q9BXS0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.53■□□□□ 0.72
COL25A1Q9BXS0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL25A1Q9BXS0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL25A1Q9BXS0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL25A1Q9BXS0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL25A1Q9BXS0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL25A1Q9BXS0 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL25A1Q9BXS0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL25A1Q9BXS0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL25A1Q9BXS0 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL25A1Q9BXS0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL25A1Q9BXS0 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
COL25A1Q9BXS0 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.53■□□□□ 0.72
COL25A1Q9BXS0 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL25A1Q9BXS0 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.53■□□□□ 0.72
COL25A1Q9BXS0 AL606495.2-201ENST00000605867 535 ntBASIC19.53■□□□□ 0.72
COL25A1Q9BXS0 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.53■□□□□ 0.72
COL25A1Q9BXS0 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.53■□□□□ 0.72
COL25A1Q9BXS0 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
COL25A1Q9BXS0 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.53■□□□□ 0.72
COL25A1Q9BXS0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL25A1Q9BXS0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL25A1Q9BXS0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
COL25A1Q9BXS0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL25A1Q9BXS0 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.53■□□□□ 0.72
COL25A1Q9BXS0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
COL25A1Q9BXS0 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL25A1Q9BXS0 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.52■□□□□ 0.72
COL25A1Q9BXS0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL25A1Q9BXS0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL25A1Q9BXS0 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL25A1Q9BXS0 POM121L3P-201ENST00000419331 1163 ntBASIC19.52■□□□□ 0.72
COL25A1Q9BXS0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.52■□□□□ 0.72
COL25A1Q9BXS0 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
COL25A1Q9BXS0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.52■□□□□ 0.72
COL25A1Q9BXS0 MINOS1P3-201ENST00000457048 203 ntBASIC19.52■□□□□ 0.72
COL25A1Q9BXS0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.52■□□□□ 0.72
COL25A1Q9BXS0 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.52■□□□□ 0.72
COL25A1Q9BXS0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.52■□□□□ 0.72
COL25A1Q9BXS0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.52■□□□□ 0.72
COL25A1Q9BXS0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.52■□□□□ 0.72
COL25A1Q9BXS0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.52■□□□□ 0.71
COL25A1Q9BXS0 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.52■□□□□ 0.71
COL25A1Q9BXS0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
COL25A1Q9BXS0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
COL25A1Q9BXS0 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
COL25A1Q9BXS0 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL25A1Q9BXS0 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL25A1Q9BXS0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
COL25A1Q9BXS0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
COL25A1Q9BXS0 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.51■□□□□ 0.71
COL25A1Q9BXS0 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL25A1Q9BXS0 GSAP-205ENST00000430584 600 ntTSL 5 BASIC19.51■□□□□ 0.71
COL25A1Q9BXS0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.51■□□□□ 0.71
COL25A1Q9BXS0 VENTXP7-201ENST00000475503 772 ntBASIC19.51■□□□□ 0.71
COL25A1Q9BXS0 RNA5SP415-201ENST00000517246 115 ntBASIC19.51■□□□□ 0.71
COL25A1Q9BXS0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
COL25A1Q9BXS0 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.51■□□□□ 0.71
COL25A1Q9BXS0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.51■□□□□ 0.71
COL25A1Q9BXS0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.51■□□□□ 0.71
COL25A1Q9BXS0 MIR4745-201ENST00000577608 62 ntBASIC19.51■□□□□ 0.71
COL25A1Q9BXS0 MIR5100-201ENST00000579544 119 ntBASIC19.51■□□□□ 0.71
COL25A1Q9BXS0 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.51■□□□□ 0.71
COL25A1Q9BXS0 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.51■□□□□ 0.71
COL25A1Q9BXS0 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL25A1Q9BXS0 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.51■□□□□ 0.71
COL25A1Q9BXS0 AC012645.4-201ENST00000610691 1061 ntBASIC19.51■□□□□ 0.71
COL25A1Q9BXS0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL25A1Q9BXS0 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.51■□□□□ 0.71
COL25A1Q9BXS0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL25A1Q9BXS0 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
COL25A1Q9BXS0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL25A1Q9BXS0 KRT8P41-201ENST00000533985 1514 ntBASIC19.51■□□□□ 0.71
COL25A1Q9BXS0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL25A1Q9BXS0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.5■□□□□ 0.71
COL25A1Q9BXS0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL25A1Q9BXS0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.5■□□□□ 0.71
COL25A1Q9BXS0 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL25A1Q9BXS0 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
COL25A1Q9BXS0 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.5■□□□□ 0.71
COL25A1Q9BXS0 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL25A1Q9BXS0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
COL25A1Q9BXS0 AC092910.1-201ENST00000482027 1129 ntBASIC19.5■□□□□ 0.71
COL25A1Q9BXS0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.5■□□□□ 0.71
COL25A1Q9BXS0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.5■□□□□ 0.71
COL25A1Q9BXS0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
COL25A1Q9BXS0 AL592071.1-201ENST00000611956 408 ntBASIC19.5■□□□□ 0.71
COL25A1Q9BXS0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL25A1Q9BXS0 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
COL25A1Q9BXS0 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms