Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim6Q8BGE7 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim6Q8BGE7 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim6Q8BGE7 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim6Q8BGE7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trim6Q8BGE7 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim6Q8BGE7 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim6Q8BGE7 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim6Q8BGE7 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.47■□□□□ 0.39
Trim6Q8BGE7 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim6Q8BGE7 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim6Q8BGE7 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim6Q8BGE7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim6Q8BGE7 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim6Q8BGE7 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim6Q8BGE7 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim6Q8BGE7 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim6Q8BGE7 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim6Q8BGE7 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim6Q8BGE7 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim6Q8BGE7 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
Trim6Q8BGE7 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trim6Q8BGE7 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim6Q8BGE7 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim6Q8BGE7 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trim6Q8BGE7 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim6Q8BGE7 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim6Q8BGE7 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim6Q8BGE7 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim6Q8BGE7 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim6Q8BGE7 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trim6Q8BGE7 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim6Q8BGE7 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.46■□□□□ 0.39
Trim6Q8BGE7 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim6Q8BGE7 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trim6Q8BGE7 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim6Q8BGE7 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim6Q8BGE7 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Trim6Q8BGE7 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim6Q8BGE7 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim6Q8BGE7 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim6Q8BGE7 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim6Q8BGE7 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.46■□□□□ 0.39
Trim6Q8BGE7 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim6Q8BGE7 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim6Q8BGE7 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim6Q8BGE7 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trim6Q8BGE7 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim6Q8BGE7 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Trim6Q8BGE7 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trim6Q8BGE7 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.45■□□□□ 0.38
Trim6Q8BGE7 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim6Q8BGE7 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim6Q8BGE7 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.45■□□□□ 0.38
Trim6Q8BGE7 Trmt13-210ENSMUST00000198454 880 ntBASIC17.45■□□□□ 0.38
Trim6Q8BGE7 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim6Q8BGE7 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trim6Q8BGE7 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim6Q8BGE7 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim6Q8BGE7 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim6Q8BGE7 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim6Q8BGE7 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim6Q8BGE7 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim6Q8BGE7 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim6Q8BGE7 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim6Q8BGE7 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim6Q8BGE7 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Trim6Q8BGE7 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim6Q8BGE7 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trim6Q8BGE7 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim6Q8BGE7 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim6Q8BGE7 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim6Q8BGE7 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim6Q8BGE7 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim6Q8BGE7 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim6Q8BGE7 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim6Q8BGE7 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim6Q8BGE7 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim6Q8BGE7 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Trim6Q8BGE7 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim6Q8BGE7 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.44■□□□□ 0.38
Trim6Q8BGE7 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trim6Q8BGE7 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim6Q8BGE7 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim6Q8BGE7 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Trim6Q8BGE7 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trim6Q8BGE7 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim6Q8BGE7 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim6Q8BGE7 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim6Q8BGE7 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim6Q8BGE7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.43■□□□□ 0.38
Trim6Q8BGE7 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.43■□□□□ 0.38
Trim6Q8BGE7 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim6Q8BGE7 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim6Q8BGE7 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim6Q8BGE7 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim6Q8BGE7 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim6Q8BGE7 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim6Q8BGE7 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim6Q8BGE7 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms