Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Upk3bQ80YF6 Gm7638-201ENSMUST00000121348 967 ntBASIC13.91□□□□□ -0.18
Upk3bQ80YF6 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.91□□□□□ -0.18
Upk3bQ80YF6 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Upk3bQ80YF6 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Upk3bQ80YF6 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.91□□□□□ -0.18
Upk3bQ80YF6 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.91□□□□□ -0.18
Upk3bQ80YF6 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Upk3bQ80YF6 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Upk3bQ80YF6 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Upk3bQ80YF6 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Upk3bQ80YF6 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.91□□□□□ -0.18
Upk3bQ80YF6 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Upk3bQ80YF6 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Upk3bQ80YF6 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Upk3bQ80YF6 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Upk3bQ80YF6 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Upk3bQ80YF6 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Upk3bQ80YF6 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Upk3bQ80YF6 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.9□□□□□ -0.18
Upk3bQ80YF6 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Upk3bQ80YF6 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Upk3bQ80YF6 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Upk3bQ80YF6 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Upk3bQ80YF6 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Upk3bQ80YF6 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Upk3bQ80YF6 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Upk3bQ80YF6 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Upk3bQ80YF6 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Upk3bQ80YF6 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Upk3bQ80YF6 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Upk3bQ80YF6 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Upk3bQ80YF6 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk3bQ80YF6 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk3bQ80YF6 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk3bQ80YF6 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk3bQ80YF6 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Upk3bQ80YF6 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk3bQ80YF6 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Upk3bQ80YF6 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk3bQ80YF6 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk3bQ80YF6 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.89□□□□□ -0.19
Upk3bQ80YF6 Gm12085-201ENSMUST00000119263 940 ntBASIC13.89□□□□□ -0.19
Upk3bQ80YF6 Gm15378-201ENSMUST00000121894 207 ntBASIC13.89□□□□□ -0.19
Upk3bQ80YF6 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.89□□□□□ -0.19
Upk3bQ80YF6 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Upk3bQ80YF6 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk3bQ80YF6 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk3bQ80YF6 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk3bQ80YF6 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Upk3bQ80YF6 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.89□□□□□ -0.19
Upk3bQ80YF6 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Upk3bQ80YF6 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk3bQ80YF6 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.89□□□□□ -0.19
Upk3bQ80YF6 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk3bQ80YF6 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk3bQ80YF6 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk3bQ80YF6 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk3bQ80YF6 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Upk3bQ80YF6 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Upk3bQ80YF6 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.88□□□□□ -0.19
Upk3bQ80YF6 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Upk3bQ80YF6 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk3bQ80YF6 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk3bQ80YF6 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk3bQ80YF6 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk3bQ80YF6 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk3bQ80YF6 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Upk3bQ80YF6 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Upk3bQ80YF6 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Upk3bQ80YF6 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Upk3bQ80YF6 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk3bQ80YF6 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Upk3bQ80YF6 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk3bQ80YF6 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Upk3bQ80YF6 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk3bQ80YF6 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Upk3bQ80YF6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk3bQ80YF6 Trmt13-210ENSMUST00000198454 880 ntBASIC13.88□□□□□ -0.19
Upk3bQ80YF6 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.88□□□□□ -0.19
Upk3bQ80YF6 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.88□□□□□ -0.19
Upk3bQ80YF6 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk3bQ80YF6 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Upk3bQ80YF6 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Upk3bQ80YF6 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk3bQ80YF6 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk3bQ80YF6 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk3bQ80YF6 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Upk3bQ80YF6 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk3bQ80YF6 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Upk3bQ80YF6 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Upk3bQ80YF6 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk3bQ80YF6 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk3bQ80YF6 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upk3bQ80YF6 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upk3bQ80YF6 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.87□□□□□ -0.19
Upk3bQ80YF6 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upk3bQ80YF6 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Upk3bQ80YF6 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upk3bQ80YF6 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 267.4 ms