Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Cux2P70298 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Cux2P70298 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Cux2P70298 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Cux2P70298 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
Cux2P70298 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Cux2P70298 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Cux2P70298 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
Cux2P70298 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Cux2P70298 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Cux2P70298 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Cux2P70298 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Cux2P70298 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
Cux2P70298 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Cux2P70298 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Cux2P70298 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Cux2P70298 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
Cux2P70298 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Cux2P70298 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC26.76■■□□□ 1.87
Cux2P70298 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Cux2P70298 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
Cux2P70298 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
Cux2P70298 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC26.76■■□□□ 1.87
Cux2P70298 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
Cux2P70298 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
Cux2P70298 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Cux2P70298 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Cux2P70298 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Cux2P70298 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Cux2P70298 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC26.75■■□□□ 1.87
Cux2P70298 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
Cux2P70298 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
Cux2P70298 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Cux2P70298 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Cux2P70298 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Cux2P70298 Gm5366-201ENSMUST00000215494 1338 ntBASIC26.75■■□□□ 1.87
Cux2P70298 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Cux2P70298 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Cux2P70298 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC26.75■■□□□ 1.87
Cux2P70298 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC26.75■■□□□ 1.87
Cux2P70298 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
Cux2P70298 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
Cux2P70298 Gm6226-201ENSMUST00000117765 1146 ntBASIC26.74■■□□□ 1.87
Cux2P70298 Gm8344-201ENSMUST00000119813 856 ntBASIC26.74■■□□□ 1.87
Cux2P70298 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC26.74■■□□□ 1.87
Cux2P70298 Gm43125-201ENSMUST00000201724 730 ntBASIC26.74■■□□□ 1.87
Cux2P70298 AC140397.2-201ENSMUST00000224213 834 ntBASIC26.74■■□□□ 1.87
Cux2P70298 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC26.74■■□□□ 1.87
Cux2P70298 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Cux2P70298 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
Cux2P70298 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
Cux2P70298 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
Cux2P70298 Gm38318-201ENSMUST00000195769 1706 ntBASIC26.74■■□□□ 1.87
Cux2P70298 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Cux2P70298 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Cux2P70298 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Cux2P70298 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Cux2P70298 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC26.73■■□□□ 1.87
Cux2P70298 Gm18889-201ENSMUST00000174284 929 ntBASIC26.73■■□□□ 1.87
Cux2P70298 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC26.73■■□□□ 1.87
Cux2P70298 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Cux2P70298 AC126408.1-201ENSMUST00000225184 523 ntBASIC26.73■■□□□ 1.87
Cux2P70298 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Cux2P70298 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC26.73■■□□□ 1.87
Cux2P70298 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC26.73■■□□□ 1.87
Cux2P70298 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Cux2P70298 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
Cux2P70298 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC26.73■■□□□ 1.87
Cux2P70298 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
Cux2P70298 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
Cux2P70298 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Cux2P70298 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC26.73■■□□□ 1.87
Cux2P70298 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC26.73■■□□□ 1.87
Cux2P70298 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC26.73■■□□□ 1.87
Cux2P70298 Gm22175-201ENSMUST00000175007 78 ntBASIC26.73■■□□□ 1.87
Cux2P70298 Gm27622-201ENSMUST00000183779 60 ntBASIC26.73■■□□□ 1.87
Cux2P70298 Mir7036b-201ENSMUST00000184791 63 ntBASIC26.73■■□□□ 1.87
Cux2P70298 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC26.73■■□□□ 1.87
Cux2P70298 Gm7787-201ENSMUST00000216858 688 ntBASIC26.73■■□□□ 1.87
Cux2P70298 Hist1h2al-201ENSMUST00000091708 339 ntBASIC26.73■■□□□ 1.87
Cux2P70298 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Cux2P70298 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Cux2P70298 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Cux2P70298 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Cux2P70298 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Cux2P70298 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Cux2P70298 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Cux2P70298 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
Cux2P70298 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Cux2P70298 Gm27301-201ENSMUST00000184012 127 ntBASIC26.72■■□□□ 1.87
Cux2P70298 Gm20553-201ENSMUST00000204205 844 ntBASIC26.72■■□□□ 1.87
Cux2P70298 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Cux2P70298 Gm13294-201ENSMUST00000121757 1330 ntBASIC26.72■■□□□ 1.87
Cux2P70298 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
Cux2P70298 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Cux2P70298 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC26.71■■□□□ 1.87
Cux2P70298 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Cux2P70298 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Cux2P70298 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Cux2P70298 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC26.71■■□□□ 1.87
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms