Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abca1P41233 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Abca1P41233 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abca1P41233 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Abca1P41233 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Abca1P41233 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
Abca1P41233 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abca1P41233 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.61□□□□□ -0.23
Abca1P41233 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abca1P41233 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abca1P41233 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abca1P41233 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abca1P41233 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abca1P41233 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abca1P41233 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abca1P41233 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abca1P41233 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Abca1P41233 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abca1P41233 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.6□□□□□ -0.23
Abca1P41233 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abca1P41233 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.6□□□□□ -0.23
Abca1P41233 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abca1P41233 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Abca1P41233 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abca1P41233 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Abca1P41233 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Abca1P41233 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abca1P41233 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Abca1P41233 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abca1P41233 Gm43294-201ENSMUST00000202850 2490 ntBASIC13.6□□□□□ -0.23
Abca1P41233 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abca1P41233 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abca1P41233 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abca1P41233 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abca1P41233 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abca1P41233 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abca1P41233 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abca1P41233 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abca1P41233 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Abca1P41233 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abca1P41233 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.6□□□□□ -0.23
Abca1P41233 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.6□□□□□ -0.23
Abca1P41233 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.6□□□□□ -0.23
Abca1P41233 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abca1P41233 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abca1P41233 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Abca1P41233 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abca1P41233 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abca1P41233 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Abca1P41233 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Abca1P41233 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.59□□□□□ -0.23
Abca1P41233 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Abca1P41233 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.59□□□□□ -0.23
Abca1P41233 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Abca1P41233 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.59□□□□□ -0.23
Abca1P41233 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Abca1P41233 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Abca1P41233 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Abca1P41233 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Abca1P41233 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Abca1P41233 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Abca1P41233 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Abca1P41233 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Abca1P41233 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Abca1P41233 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.59□□□□□ -0.23
Abca1P41233 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Abca1P41233 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Abca1P41233 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Abca1P41233 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Abca1P41233 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Abca1P41233 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Abca1P41233 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Abca1P41233 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Abca1P41233 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Abca1P41233 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Abca1P41233 Gm27867-201ENSMUST00000184778 125 ntBASIC13.59□□□□□ -0.23
Abca1P41233 Gm6376-201ENSMUST00000209407 580 ntBASIC13.59□□□□□ -0.23
Abca1P41233 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Abca1P41233 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
Abca1P41233 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Abca1P41233 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Abca1P41233 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Abca1P41233 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Abca1P41233 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.58□□□□□ -0.24
Abca1P41233 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Abca1P41233 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Abca1P41233 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Abca1P41233 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Abca1P41233 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Abca1P41233 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Abca1P41233 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.58□□□□□ -0.24
Abca1P41233 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Abca1P41233 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.58□□□□□ -0.24
Abca1P41233 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.58□□□□□ -0.24
Abca1P41233 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Abca1P41233 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Abca1P41233 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Abca1P41233 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Abca1P41233 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Abca1P41233 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms