Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc6a1P31648 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc6a1P31648 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc6a1P31648 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.17□□□□□ -0.14
Slc6a1P31648 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Slc6a1P31648 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc6a1P31648 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Slc6a1P31648 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc6a1P31648 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc6a1P31648 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Slc6a1P31648 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc6a1P31648 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.17□□□□□ -0.14
Slc6a1P31648 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc6a1P31648 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.17□□□□□ -0.14
Slc6a1P31648 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a1P31648 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.16□□□□□ -0.14
Slc6a1P31648 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a1P31648 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a1P31648 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.16□□□□□ -0.14
Slc6a1P31648 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a1P31648 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a1P31648 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a1P31648 Gm18666-201ENSMUST00000190039 958 ntBASIC14.16□□□□□ -0.14
Slc6a1P31648 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Slc6a1P31648 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a1P31648 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Slc6a1P31648 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a1P31648 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Slc6a1P31648 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Slc6a1P31648 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Slc6a1P31648 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a1P31648 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a1P31648 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.15□□□□□ -0.14
Slc6a1P31648 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Slc6a1P31648 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.15□□□□□ -0.14
Slc6a1P31648 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a1P31648 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a1P31648 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a1P31648 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a1P31648 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a1P31648 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a1P31648 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a1P31648 Gm13401-201ENSMUST00000117074 291 ntBASIC14.15□□□□□ -0.14
Slc6a1P31648 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a1P31648 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a1P31648 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a1P31648 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.15□□□□□ -0.14
Slc6a1P31648 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a1P31648 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a1P31648 Gm10812-201ENSMUST00000099864 546 ntBASIC14.15□□□□□ -0.14
Slc6a1P31648 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Slc6a1P31648 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a1P31648 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a1P31648 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Slc6a1P31648 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a1P31648 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Slc6a1P31648 Dio3-201ENSMUST00000097228 1449 ntBASIC14.15□□□□□ -0.14
Slc6a1P31648 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a1P31648 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.15□□□□□ -0.15
Slc6a1P31648 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a1P31648 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a1P31648 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.14□□□□□ -0.15
Slc6a1P31648 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.14□□□□□ -0.15
Slc6a1P31648 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Slc6a1P31648 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a1P31648 Gm12896-201ENSMUST00000118430 226 ntBASIC14.14□□□□□ -0.15
Slc6a1P31648 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a1P31648 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a1P31648 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.14□□□□□ -0.15
Slc6a1P31648 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a1P31648 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Slc6a1P31648 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a1P31648 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a1P31648 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a1P31648 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a1P31648 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a1P31648 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a1P31648 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a1P31648 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a1P31648 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a1P31648 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a1P31648 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a1P31648 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Slc6a1P31648 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Slc6a1P31648 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a1P31648 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a1P31648 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a1P31648 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Slc6a1P31648 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a1P31648 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a1P31648 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a1P31648 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a1P31648 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a1P31648 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a1P31648 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a1P31648 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a1P31648 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a1P31648 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a1P31648 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.13□□□□□ -0.15
Slc6a1P31648 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms