Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.91■■□□□ 1.1
COL11A1P12107 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.91■■□□□ 1.1
COL11A1P12107 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
COL11A1P12107 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL11A1P12107 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.91■■□□□ 1.1
COL11A1P12107 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.91■■□□□ 1.1
COL11A1P12107 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL11A1P12107 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.91■■□□□ 1.1
COL11A1P12107 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL11A1P12107 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL11A1P12107 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
COL11A1P12107 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL11A1P12107 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL11A1P12107 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL11A1P12107 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL11A1P12107 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL11A1P12107 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.9■■□□□ 1.1
COL11A1P12107 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL11A1P12107 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
COL11A1P12107 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
COL11A1P12107 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.9■■□□□ 1.1
COL11A1P12107 Z82202.1-201ENST00000623446 1880 ntBASIC21.9■■□□□ 1.1
COL11A1P12107 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
COL11A1P12107 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.9■■□□□ 1.1
COL11A1P12107 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL11A1P12107 GPAT2P1-201ENST00000444924 1672 ntBASIC21.9■■□□□ 1.1
COL11A1P12107 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL11A1P12107 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL11A1P12107 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.9■■□□□ 1.1
COL11A1P12107 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.9■■□□□ 1.1
COL11A1P12107 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
COL11A1P12107 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL11A1P12107 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.9■■□□□ 1.1
COL11A1P12107 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL11A1P12107 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.9■■□□□ 1.1
COL11A1P12107 HYMAI.1-201ENST00000620949 238 ntBASIC21.9■■□□□ 1.1
COL11A1P12107 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL11A1P12107 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
COL11A1P12107 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.89■■□□□ 1.1
COL11A1P12107 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL11A1P12107 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL11A1P12107 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.89■■□□□ 1.09
COL11A1P12107 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
COL11A1P12107 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.89■■□□□ 1.09
COL11A1P12107 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.89■■□□□ 1.09
COL11A1P12107 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL11A1P12107 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.89■■□□□ 1.09
COL11A1P12107 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
COL11A1P12107 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL11A1P12107 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
COL11A1P12107 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.89■■□□□ 1.09
COL11A1P12107 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.89■■□□□ 1.09
COL11A1P12107 CLDN5-201ENST00000403084 2357 ntBASIC21.89■■□□□ 1.09
COL11A1P12107 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL11A1P12107 HOMER2P1-201ENST00000455653 964 ntBASIC21.89■■□□□ 1.09
COL11A1P12107 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.89■■□□□ 1.09
COL11A1P12107 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.89■■□□□ 1.09
COL11A1P12107 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.89■■□□□ 1.09
COL11A1P12107 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
COL11A1P12107 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL11A1P12107 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
COL11A1P12107 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COL11A1P12107 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
COL11A1P12107 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
COL11A1P12107 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL11A1P12107 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COL11A1P12107 TSPY21P-201ENST00000433481 731 ntBASIC21.88■■□□□ 1.09
COL11A1P12107 GCSHP2-201ENST00000560971 527 ntBASIC21.88■■□□□ 1.09
COL11A1P12107 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.88■■□□□ 1.09
COL11A1P12107 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL11A1P12107 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL11A1P12107 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL11A1P12107 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.88■■□□□ 1.09
COL11A1P12107 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL11A1P12107 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.87■■□□□ 1.09
COL11A1P12107 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL11A1P12107 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL11A1P12107 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL11A1P12107 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.87■■□□□ 1.09
COL11A1P12107 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.87■■□□□ 1.09
COL11A1P12107 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL11A1P12107 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL11A1P12107 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL11A1P12107 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL11A1P12107 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.87■■□□□ 1.09
COL11A1P12107 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL11A1P12107 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.87■■□□□ 1.09
COL11A1P12107 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL11A1P12107 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.87■■□□□ 1.09
COL11A1P12107 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL11A1P12107 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.86■■□□□ 1.09
COL11A1P12107 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL11A1P12107 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.86■■□□□ 1.09
COL11A1P12107 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL11A1P12107 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.86■■□□□ 1.09
COL11A1P12107 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL11A1P12107 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL11A1P12107 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL11A1P12107 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.86■■□□□ 1.09
COL11A1P12107 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms