Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL4A2P08572 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL4A2P08572 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL4A2P08572 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
COL4A2P08572 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.44■□□□□ 0.7
COL4A2P08572 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.44■□□□□ 0.7
COL4A2P08572 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.44■□□□□ 0.7
COL4A2P08572 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.44■□□□□ 0.7
COL4A2P08572 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
COL4A2P08572 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.44■□□□□ 0.7
COL4A2P08572 AC111152.3-201ENST00000569699 673 ntBASIC19.44■□□□□ 0.7
COL4A2P08572 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL4A2P08572 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL4A2P08572 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
COL4A2P08572 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.44■□□□□ 0.7
COL4A2P08572 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL4A2P08572 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL4A2P08572 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.44■□□□□ 0.7
COL4A2P08572 ZNF815P-204ENST00000434898 1737 ntBASIC19.44■□□□□ 0.7
COL4A2P08572 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.44■□□□□ 0.7
COL4A2P08572 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.44■□□□□ 0.7
COL4A2P08572 KRT8P10-201ENST00000450021 1447 ntBASIC19.44■□□□□ 0.7
COL4A2P08572 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL4A2P08572 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL4A2P08572 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL4A2P08572 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.43■□□□□ 0.7
COL4A2P08572 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.43■□□□□ 0.7
COL4A2P08572 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL4A2P08572 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL4A2P08572 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL4A2P08572 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.43■□□□□ 0.7
COL4A2P08572 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.43■□□□□ 0.7
COL4A2P08572 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL4A2P08572 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL4A2P08572 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL4A2P08572 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL4A2P08572 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL4A2P08572 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.43■□□□□ 0.7
COL4A2P08572 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.43■□□□□ 0.7
COL4A2P08572 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A2P08572 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A2P08572 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A2P08572 PVRIG2P-201ENST00000435460 978 ntBASIC19.42■□□□□ 0.7
COL4A2P08572 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.42■□□□□ 0.7
COL4A2P08572 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A2P08572 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.42■□□□□ 0.7
COL4A2P08572 RN7SL510P-201ENST00000581311 263 ntBASIC19.42■□□□□ 0.7
COL4A2P08572 AC092119.3-201ENST00000612618 583 ntBASIC19.42■□□□□ 0.7
COL4A2P08572 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.42■□□□□ 0.7
COL4A2P08572 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
COL4A2P08572 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
COL4A2P08572 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A2P08572 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.42■□□□□ 0.7
COL4A2P08572 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A2P08572 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
COL4A2P08572 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.42■□□□□ 0.7
COL4A2P08572 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A2P08572 AP002383.4-201ENST00000442518 975 ntBASIC19.42■□□□□ 0.7
COL4A2P08572 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.42■□□□□ 0.7
COL4A2P08572 PRELID1P1-202ENST00000567272 903 ntBASIC19.42■□□□□ 0.7
COL4A2P08572 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A2P08572 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A2P08572 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A2P08572 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
COL4A2P08572 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.42■□□□□ 0.7
COL4A2P08572 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A2P08572 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
COL4A2P08572 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL4A2P08572 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
COL4A2P08572 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL4A2P08572 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL4A2P08572 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
COL4A2P08572 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL4A2P08572 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL4A2P08572 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.41■□□□□ 0.7
COL4A2P08572 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.41■□□□□ 0.7
COL4A2P08572 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL4A2P08572 AC034232.1-201ENST00000506026 1064 ntBASIC19.41■□□□□ 0.7
COL4A2P08572 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL4A2P08572 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.41■□□□□ 0.7
COL4A2P08572 AL691432.3-201ENST00000621860 400 ntBASIC19.41■□□□□ 0.7
COL4A2P08572 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.41■□□□□ 0.7
COL4A2P08572 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL4A2P08572 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL4A2P08572 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.4■□□□□ 0.7
COL4A2P08572 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL4A2P08572 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.4■□□□□ 0.7
COL4A2P08572 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.4■□□□□ 0.7
COL4A2P08572 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL4A2P08572 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL4A2P08572 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
COL4A2P08572 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.4■□□□□ 0.7
COL4A2P08572 HLA-F-220ENST00000434407 884 ntBASIC19.4■□□□□ 0.7
COL4A2P08572 FDX1P1-201ENST00000449115 551 ntBASIC19.4■□□□□ 0.7
COL4A2P08572 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.4■□□□□ 0.7
COL4A2P08572 TPSP2-201ENST00000561760 610 ntBASIC19.4■□□□□ 0.7
COL4A2P08572 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
COL4A2P08572 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.4■□□□□ 0.7
COL4A2P08572 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL4A2P08572 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms