Protein–RNA interactions for Protein: F6U473

Gm28305, Predicted gene 28305 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28305F6U473 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Gm28305F6U473 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm28305F6U473 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm28305F6U473 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm28305F6U473 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm28305F6U473 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Gm28305F6U473 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm28305F6U473 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gm28305F6U473 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm28305F6U473 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm28305F6U473 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gm28305F6U473 Gm22325-201ENSMUST00000158904 308 ntBASIC12.15□□□□□ -0.46
Gm28305F6U473 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm28305F6U473 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gm28305F6U473 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Gm28305F6U473 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm28305F6U473 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Gm28305F6U473 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Gm28305F6U473 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm28305F6U473 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Gm28305F6U473 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm28305F6U473 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm28305F6U473 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Gm28305F6U473 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Gm28305F6U473 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Gm28305F6U473 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Gm28305F6U473 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28305F6U473 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28305F6U473 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.14□□□□□ -0.47
Gm28305F6U473 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28305F6U473 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.14□□□□□ -0.47
Gm28305F6U473 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28305F6U473 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.14□□□□□ -0.47
Gm28305F6U473 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC12.14□□□□□ -0.47
Gm28305F6U473 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28305F6U473 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28305F6U473 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28305F6U473 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28305F6U473 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC12.14□□□□□ -0.47
Gm28305F6U473 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC12.14□□□□□ -0.47
Gm28305F6U473 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28305F6U473 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28305F6U473 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28305F6U473 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28305F6U473 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28305F6U473 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28305F6U473 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28305F6U473 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28305F6U473 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28305F6U473 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28305F6U473 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28305F6U473 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28305F6U473 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28305F6U473 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28305F6U473 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Gm28305F6U473 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28305F6U473 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28305F6U473 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Gm28305F6U473 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28305F6U473 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28305F6U473 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28305F6U473 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28305F6U473 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.13□□□□□ -0.47
Gm28305F6U473 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Gm28305F6U473 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28305F6U473 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Gm28305F6U473 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28305F6U473 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28305F6U473 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Gm28305F6U473 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28305F6U473 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Gm28305F6U473 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC12.13□□□□□ -0.47
Gm28305F6U473 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC12.13□□□□□ -0.47
Gm28305F6U473 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28305F6U473 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28305F6U473 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28305F6U473 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28305F6U473 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28305F6U473 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.13□□□□□ -0.47
Gm28305F6U473 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28305F6U473 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Gm28305F6U473 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28305F6U473 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28305F6U473 Gm43272-201ENSMUST00000200599 1584 ntBASIC12.13□□□□□ -0.47
Gm28305F6U473 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28305F6U473 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.13□□□□□ -0.47
Gm28305F6U473 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Gm28305F6U473 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28305F6U473 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28305F6U473 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28305F6U473 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28305F6U473 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28305F6U473 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28305F6U473 Asic1-205ENSMUST00000228185 1818 ntBASIC12.12□□□□□ -0.47
Gm28305F6U473 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.12□□□□□ -0.47
Gm28305F6U473 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28305F6U473 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28305F6U473 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Gm28305F6U473 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28305F6U473 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms