Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
LOC102724428A0A0B4J2F2 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC24.51■■□□□ 1.51
LOC102724428A0A0B4J2F2 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
LOC102724428A0A0B4J2F2 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
LOC102724428A0A0B4J2F2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
LOC102724428A0A0B4J2F2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC24.51■■□□□ 1.51
LOC102724428A0A0B4J2F2 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
LOC102724428A0A0B4J2F2 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC24.51■■□□□ 1.51
LOC102724428A0A0B4J2F2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC24.51■■□□□ 1.51
LOC102724428A0A0B4J2F2 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC24.51■■□□□ 1.51
LOC102724428A0A0B4J2F2 AC111152.3-201ENST00000569699 673 ntBASIC24.51■■□□□ 1.51
LOC102724428A0A0B4J2F2 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
LOC102724428A0A0B4J2F2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
LOC102724428A0A0B4J2F2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC24.51■■□□□ 1.51
LOC102724428A0A0B4J2F2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC24.51■■□□□ 1.51
LOC102724428A0A0B4J2F2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC24.51■■□□□ 1.51
LOC102724428A0A0B4J2F2 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC24.51■■□□□ 1.51
LOC102724428A0A0B4J2F2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
LOC102724428A0A0B4J2F2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
LOC102724428A0A0B4J2F2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
LOC102724428A0A0B4J2F2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
LOC102724428A0A0B4J2F2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
LOC102724428A0A0B4J2F2 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
LOC102724428A0A0B4J2F2 AC104417.2-201ENST00000562989 1793 ntBASIC24.5■■□□□ 1.51
LOC102724428A0A0B4J2F2 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
LOC102724428A0A0B4J2F2 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC24.5■■□□□ 1.51
LOC102724428A0A0B4J2F2 PVRIG2P-201ENST00000435460 978 ntBASIC24.5■■□□□ 1.51
LOC102724428A0A0B4J2F2 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC24.5■■□□□ 1.51
LOC102724428A0A0B4J2F2 BX276092.5-203ENST00000456199 560 ntBASIC24.5■■□□□ 1.51
LOC102724428A0A0B4J2F2 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC24.5■■□□□ 1.51
LOC102724428A0A0B4J2F2 AP005212.1-201ENST00000581547 1997 ntBASIC24.5■■□□□ 1.51
LOC102724428A0A0B4J2F2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC24.5■■□□□ 1.51
LOC102724428A0A0B4J2F2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
LOC102724428A0A0B4J2F2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
LOC102724428A0A0B4J2F2 GPAT2P1-201ENST00000444924 1672 ntBASIC24.5■■□□□ 1.51
LOC102724428A0A0B4J2F2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
LOC102724428A0A0B4J2F2 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
LOC102724428A0A0B4J2F2 PPIH-202ENST00000372549 327 ntTSL 3 BASIC24.49■■□□□ 1.51
LOC102724428A0A0B4J2F2 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC24.49■■□□□ 1.51
LOC102724428A0A0B4J2F2 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC24.49■■□□□ 1.51
LOC102724428A0A0B4J2F2 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC24.49■■□□□ 1.51
LOC102724428A0A0B4J2F2 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC24.49■■□□□ 1.51
LOC102724428A0A0B4J2F2 AC024243.1-201ENST00000609234 778 ntBASIC24.49■■□□□ 1.51
LOC102724428A0A0B4J2F2 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC24.49■■□□□ 1.51
LOC102724428A0A0B4J2F2 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
LOC102724428A0A0B4J2F2 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC24.49■■□□□ 1.51
LOC102724428A0A0B4J2F2 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
LOC102724428A0A0B4J2F2 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC24.49■■□□□ 1.51
LOC102724428A0A0B4J2F2 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
LOC102724428A0A0B4J2F2 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC24.49■■□□□ 1.51
LOC102724428A0A0B4J2F2 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
LOC102724428A0A0B4J2F2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
LOC102724428A0A0B4J2F2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
LOC102724428A0A0B4J2F2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
LOC102724428A0A0B4J2F2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
LOC102724428A0A0B4J2F2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC24.49■■□□□ 1.51
LOC102724428A0A0B4J2F2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
LOC102724428A0A0B4J2F2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
LOC102724428A0A0B4J2F2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
LOC102724428A0A0B4J2F2 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
LOC102724428A0A0B4J2F2 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
LOC102724428A0A0B4J2F2 AC004870.1-201ENST00000315132 882 ntBASIC24.48■■□□□ 1.51
LOC102724428A0A0B4J2F2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
LOC102724428A0A0B4J2F2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
LOC102724428A0A0B4J2F2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
LOC102724428A0A0B4J2F2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
LOC102724428A0A0B4J2F2 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC24.48■■□□□ 1.51
LOC102724428A0A0B4J2F2 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
LOC102724428A0A0B4J2F2 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC24.48■■□□□ 1.51
LOC102724428A0A0B4J2F2 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
LOC102724428A0A0B4J2F2 AL512408.1-201ENST00000569378 2000 ntBASIC24.48■■□□□ 1.51
LOC102724428A0A0B4J2F2 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
LOC102724428A0A0B4J2F2 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC24.48■■□□□ 1.51
LOC102724428A0A0B4J2F2 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
LOC102724428A0A0B4J2F2 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
LOC102724428A0A0B4J2F2 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC24.47■■□□□ 1.51
LOC102724428A0A0B4J2F2 AC073314.1-201ENST00000568729 2216 ntBASIC24.47■■□□□ 1.51
LOC102724428A0A0B4J2F2 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
LOC102724428A0A0B4J2F2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
LOC102724428A0A0B4J2F2 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
LOC102724428A0A0B4J2F2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC24.47■■□□□ 1.51
LOC102724428A0A0B4J2F2 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
LOC102724428A0A0B4J2F2 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
LOC102724428A0A0B4J2F2 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC24.47■■□□□ 1.51
LOC102724428A0A0B4J2F2 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
LOC102724428A0A0B4J2F2 AP000347.1-202ENST00000435868 847 ntBASIC24.47■■□□□ 1.51
LOC102724428A0A0B4J2F2 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
LOC102724428A0A0B4J2F2 KRT17P6-201ENST00000453795 1220 ntBASIC24.47■■□□□ 1.51
LOC102724428A0A0B4J2F2 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC24.47■■□□□ 1.51
LOC102724428A0A0B4J2F2 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC24.47■■□□□ 1.51
LOC102724428A0A0B4J2F2 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC24.47■■□□□ 1.51
LOC102724428A0A0B4J2F2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC24.47■■□□□ 1.51
LOC102724428A0A0B4J2F2 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
LOC102724428A0A0B4J2F2 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC24.47■■□□□ 1.51
LOC102724428A0A0B4J2F2 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
LOC102724428A0A0B4J2F2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
LOC102724428A0A0B4J2F2 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
LOC102724428A0A0B4J2F2 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC24.47■■□□□ 1.51
LOC102724428A0A0B4J2F2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC24.47■■□□□ 1.51
LOC102724428A0A0B4J2F2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms