Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 RNU2-65P-201ENST00000410162 185 ntBASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 AL139421.1-201ENST00000423010 169 ntBASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 DPRXP1-201ENST00000426312 460 ntBASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 AC008065.1-201ENST00000428525 348 ntBASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 ELOCP18-201ENST00000434209 337 ntBASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 RANP8-201ENST00000444720 713 ntBASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 AC073387.1-201ENST00000453261 709 ntBASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 OR9M1P-201ENST00000459641 921 ntBASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 GAPDHP36-201ENST00000480688 918 ntBASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 AC011352.3-201ENST00000505162 593 ntBASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 NPM1P41-201ENST00000512920 831 ntBASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 AC105185.1-201ENST00000518705 535 ntBASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 HIGD1AP6-201ENST00000521833 279 ntBASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 AC092851.1-201ENST00000535964 478 ntBASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 ELOCP32-201ENST00000548625 324 ntBASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 AC009101.1-201ENST00000568135 242 ntBASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 AC141257.3-201ENST00000572906 215 ntBASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 AC072039.2-201ENST00000608883 439 ntBASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 AC073530.2-201ENST00000623987 261 ntBASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 OR8B1P-202ENST00000641132 1178 ntBASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SNX9Q9Y5X1 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 AC097504.1-201ENST00000515103 2415 ntBASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 XIAPP3-201ENST00000312918 795 ntBASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 RNU6-621P-201ENST00000364752 109 ntBASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 RNA5SP97-201ENST00000365006 84 ntBASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 AC025750.1-201ENST00000399891 379 ntBASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 LUZP4P1-201ENST00000415420 344 ntBASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 MTND4P20-201ENST00000424125 869 ntBASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 AC083863.1-201ENST00000438811 231 ntBASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 ELOCP8-201ENST00000439309 332 ntBASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 HMGB1P37-201ENST00000439613 609 ntBASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 ELOCP15-201ENST00000442090 332 ntBASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 MTCO2P25-201ENST00000447065 681 ntBASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 RPL7P59-201ENST00000447700 943 ntBASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 AL109741.2-201ENST00000455561 343 ntBASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 PNPLA4P1-201ENST00000458328 305 ntBASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 RPL21P11-201ENST00000461458 483 ntBASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 RPL21P71-201ENST00000465598 459 ntBASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 AC104689.1-201ENST00000473356 768 ntBASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 RPL7P18-201ENST00000478965 734 ntBASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 RPS3AP43-201ENST00000479743 781 ntBASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 RPL21P103-201ENST00000479921 488 ntBASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 AC008885.2-201ENST00000509506 930 ntBASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 AC048346.1-201ENST00000510247 144 ntBASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 MTND1P22-201ENST00000510572 951 ntBASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 MTND4LP31-201ENST00000514859 294 ntBASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 RNU6-1225P-201ENST00000516336 65 ntBASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 AC087369.1-201ENST00000520775 996 ntBASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 CBX3P5-201ENST00000552017 521 ntBASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 LLPHP1-201ENST00000603571 367 ntBASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 AL109618.2-201ENST00000605527 211 ntBASIC4.2□□□□□ -1.74
SNX9Q9Y5X1 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms