Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 HMGB3P17-201ENST00000504195 649 ntBASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 Y_RNA.680-201ENST00000516441 93 ntBASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 AC139365.2-201ENST00000517972 253 ntBASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 EIF4A2P5-201ENST00000529914 499 ntBASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 AC091516.1-201ENST00000549191 703 ntBASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 AL359547.2-201ENST00000615810 418 ntBASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 MIR6864-201ENST00000617935 70 ntBASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.84□□□□□ -1.47
HRH3Q9Y5N1 SOCS5P3-201ENST00000425115 1576 ntBASIC5.84□□□□□ -1.48
HRH3Q9Y5N1 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
HRH3Q9Y5N1 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
HRH3Q9Y5N1 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.48
HRH3Q9Y5N1 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 AC025809.2-201ENST00000625085 1802 ntBASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 Y_RNA.14-201ENST00000362415 103 ntBASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 Y_RNA.60-201ENST00000362831 98 ntBASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 Y_RNA.276-201ENST00000364732 109 ntBASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 RNU11-201ENST00000387069 134 ntBASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 MRPS21P2-201ENST00000424704 264 ntBASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 RPSAP65-201ENST00000429660 595 ntBASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 RHOT1P3-201ENST00000436571 331 ntBASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 OR3D1P-201ENST00000438288 955 ntBASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 AP001086.1-201ENST00000494882 321 ntBASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 RNU2-69P-201ENST00000516061 100 ntBASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 IGLVIV-53-201ENST00000520107 367 ntBASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 AC100870.1-201ENST00000522035 505 ntBASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 HSPE1P20-201ENST00000538133 289 ntBASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 AL360012.1-201ENST00000602813 131 ntBASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 AP002370.1-201ENST00000528055 1602 ntBASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 MSL3P1-202ENST00000440028 1468 ntBASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.83□□□□□ -1.48
HRH3Q9Y5N1 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 AL137003.2-201ENST00000606924 2538 ntBASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 AC108751.5-201ENST00000492880 1336 ntBASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 RNU6-637P-201ENST00000384050 107 ntBASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 Y_RNA.478-201ENST00000384358 107 ntBASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 Y_RNA.526-201ENST00000384572 110 ntBASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 RNU6-754P-201ENST00000391166 107 ntBASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 RPL21P24-201ENST00000413752 448 ntBASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 MRPS18CP6-201ENST00000423587 223 ntBASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 RPL12P34-201ENST00000424532 479 ntBASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 AL354707.3-201ENST00000427308 331 ntBASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 AC011816.1-201ENST00000441346 546 ntBASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 RPL5P7-201ENST00000444235 813 ntBASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 AC105399.1-202ENST00000447303 205 ntBASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 AC117503.1-201ENST00000472241 394 ntBASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 AP000926.1-201ENST00000479573 241 ntBASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 GZMAP1-201ENST00000503054 631 ntBASIC5.82□□□□□ -1.48
HRH3Q9Y5N1 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms