Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 LINC00561-201ENST00000565815 2738 ntBASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 RNU6-1066P-201ENST00000363573 105 ntBASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 RNU6-335P-201ENST00000364563 113 ntBASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 RNU6-339P-201ENST00000384310 107 ntBASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 MIR607-201ENST00000385241 96 ntBASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 MT-TC-201ENST00000387405 66 ntBASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 AL590704.1-201ENST00000402856 794 ntBASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 AL079342.2-201ENST00000403367 482 ntBASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 SNORA57.3-201ENST00000411095 141 ntBASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 AL136133.1-201ENST00000413694 376 ntBASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 MTCO1P3-201ENST00000429327 192 ntBASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 RPL31P54-201ENST00000429803 370 ntBASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 AL035246.1-201ENST00000433554 1255 ntBASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 EXOSC3P1-201ENST00000448649 500 ntBASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 AC006480.1-201ENST00000449887 378 ntBASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 AC007537.2-201ENST00000472093 511 ntBASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 RN7SKP209-201ENST00000516888 304 ntBASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 AP001207.2-201ENST00000519490 539 ntBASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 AP001317.1-201ENST00000531194 960 ntBASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 SNORD39.3-201ENST00000584451 71 ntBASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 SNRPGP15-201ENST00000600149 222 ntBASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 AC007687.1-201ENST00000602704 304 ntBASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 AC245389.1-201ENST00000605141 529 ntBASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 AC016597.2-201ENST00000613256 341 ntBASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 AL354976.1-201ENST00000613843 387 ntBASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 MFSD8-245ENST00000641743 948 ntBASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ATG4BQ9Y4P1 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
ATG4BQ9Y4P1 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 RPS4XP5-202ENST00000449995 1334 ntBASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 USP8P1-201ENST00000494673 3183 ntBASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 RNU6-374P-201ENST00000364146 108 ntBASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 RNU6-707P-201ENST00000364647 95 ntBASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 SNORD116-12-201ENST00000384468 92 ntBASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 VN1R51P-201ENST00000411675 945 ntBASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 RPL21P109-201ENST00000422213 475 ntBASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 SDCBPP2-201ENST00000424643 885 ntBASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 RPL21P112-201ENST00000434403 463 ntBASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 AL138799.3-201ENST00000438968 350 ntBASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 AC092393.1-201ENST00000439625 742 ntBASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 NOTCH2P1-201ENST00000443481 624 ntBASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 AL358794.1-201ENST00000445689 381 ntBASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 NPM1P49-201ENST00000448027 714 ntBASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 RN7SL93P-201ENST00000463035 293 ntBASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 AL133162.1-201ENST00000463228 453 ntBASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 RPL5P24-201ENST00000463742 885 ntBASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 AC022034.3-201ENST00000471393 478 ntBASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 AC010301.1-201ENST00000473936 355 ntBASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 AC113420.1-201ENST00000507903 571 ntBASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 TPT1P8-201ENST00000510120 555 ntBASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 AC008011.1-201ENST00000545989 227 ntBASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 AC012182.1-201ENST00000570133 895 ntBASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 AL669831.4-202ENST00000590817 238 ntBASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 GAS5-AS1-201ENST00000602767 694 ntBASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 AL049634.3-201ENST00000604968 457 ntBASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 RNU1-30P-201ENST00000606575 163 ntBASIC3.52□□□□□ -1.85
ATG4BQ9Y4P1 AL157392.4-201ENST00000609756 345 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms