Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 MIR92A2-201ENST00000385299 75 ntBASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 DEFB108C-201ENST00000400154 252 ntBASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 RN7SKP27-201ENST00000410684 333 ntBASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 AC073264.1-201ENST00000411508 416 ntBASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 AC009237.2-201ENST00000421358 284 ntBASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 RPL23AP38-201ENST00000423801 469 ntBASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 USP9YP29-201ENST00000445112 563 ntBASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 BMI1P1-201ENST00000445879 941 ntBASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 RPS15AP1-201ENST00000457423 391 ntBASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 ARPC3P2-201ENST00000457786 533 ntBASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 AC013828.1-201ENST00000481845 158 ntBASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 AF213884.2-201ENST00000510417 903 ntBASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 CDC42P4-201ENST00000510507 563 ntBASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 RNU6-202P-201ENST00000515998 96 ntBASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 RNU6-583P-201ENST00000516012 92 ntBASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 RNA5SP216-201ENST00000516111 123 ntBASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 SLC25A36P1-201ENST00000590111 465 ntBASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 AC073648.5-201ENST00000603502 305 ntBASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 AC079587.1-201ENST00000603846 277 ntBASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 AC107304.1-201ENST00000604229 296 ntBASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 AC020634.1-201ENST00000608701 549 ntBASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 AC078899.5-201ENST00000612475 178 ntBASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 MIR7154-201ENST00000620673 73 ntBASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 OR2L1P-202ENST00000641567 1023 ntBASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 AL049555.1-201ENST00000562834 1933 ntBASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.74□□□□□ -1.65
SSX2IPQ9Y2D8 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 AL079343.1-201ENST00000572358 1771 ntBASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 MTCO1P23-201ENST00000415223 1526 ntBASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 MIR448-201ENST00000362131 111 ntBASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 MIR383-201ENST00000362257 73 ntBASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 RNU6-501P-201ENST00000364072 100 ntBASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 RNA5SP515-201ENST00000364570 118 ntBASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 MIR921-201ENST00000401133 56 ntBASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 AL450338.1-201ENST00000407987 512 ntBASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 ELOCP17-201ENST00000414751 326 ntBASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 AC073335.1-201ENST00000427776 363 ntBASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 RPL37P1-201ENST00000432310 284 ntBASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 COX6CP12-201ENST00000446748 202 ntBASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 RPS7P7-201ENST00000463499 571 ntBASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 RPS26P28-201ENST00000470806 348 ntBASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 RPS4XP18-201ENST00000495480 763 ntBASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 AC018797.3-201ENST00000513388 1241 ntBASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 MTCYBP43-201ENST00000513621 740 ntBASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 RN7SKP96-201ENST00000516948 297 ntBASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 AC087276.1-201ENST00000529659 480 ntBASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 MTND6P33-201ENST00000571794 183 ntBASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.73□□□□□ -1.65
SSX2IPQ9Y2D8 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms