Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 OR5B10P-201ENST00000532869 642 ntBASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 AC112503.1-201ENST00000608436 391 ntBASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 MIR8058-201ENST00000615737 89 ntBASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 RNU6-156P-201ENST00000621869 107 ntBASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 ELL2P4-201ENST00000446870 1376 ntBASIC3.12□□□□□ -1.91
TRAPPC4Q9Y296 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 AC032011.1-201ENST00000611703 1549 ntBASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 SNORA70E-201ENST00000384492 135 ntBASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 AL355615.1-201ENST00000406187 641 ntBASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 RNU2-21P-201ENST00000410368 188 ntBASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 AL024507.1-201ENST00000412741 274 ntBASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 RPL21P110-201ENST00000433345 446 ntBASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 GOT2P5-201ENST00000433995 546 ntBASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 CYCSP43-201ENST00000438233 310 ntBASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 AC002542.1-201ENST00000440683 193 ntBASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 SEPT14P24-201ENST00000447236 180 ntBASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 HMGN1P5-201ENST00000448591 263 ntBASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 OR51B8P-201ENST00000449892 769 ntBASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 RPS27P23-201ENST00000487608 251 ntBASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 AC093278.1-201ENST00000494700 600 ntBASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 AP002812.1-201ENST00000495378 474 ntBASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 AC112206.4-201ENST00000515142 405 ntBASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 SNORA67.7-201ENST00000516664 135 ntBASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 SOD1P3-201ENST00000518682 454 ntBASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 IGKV2D-19-201ENST00000523346 262 ntBASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 AP003066.2-201ENST00000529375 555 ntBASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 OR5D17P-201ENST00000531492 978 ntBASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 AC068339.2-201ENST00000534395 618 ntBASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 AC245389.1-201ENST00000605141 529 ntBASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 AC005014.3-201ENST00000605985 190 ntBASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 AC092354.2-201ENST00000607786 514 ntBASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 AC048347.1-201ENST00000624621 427 ntBASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 AL049781.1-201ENST00000623195 3585 ntBASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 XPOTP1-201ENST00000443317 2398 ntBASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 AL136520.1-201ENST00000600311 1322 ntBASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 AC025263.3-201ENST00000622965 1396 ntBASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRAPPC4Q9Y296 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 AL356274.2-201ENST00000624379 3752 ntBASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 SNORA31-201ENST00000362607 130 ntBASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 RNA5SP189-201ENST00000364920 115 ntBASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 MIR525-201ENST00000384978 85 ntBASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 MIR449B-201ENST00000384995 97 ntBASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 RPS29P4-201ENST00000414733 161 ntBASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 UBE2V1P9-201ENST00000414760 368 ntBASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 CRYBB2P1-203ENST00000415709 538 ntBASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 AC007390.1-201ENST00000415722 356 ntBASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 BX842559.1-201ENST00000419615 532 ntBASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 SDCBPP3-201ENST00000419629 891 ntBASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 AC246680.2-201ENST00000422106 389 ntBASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 AC013262.1-201ENST00000426710 252 ntBASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 AC091286.1-201ENST00000431233 461 ntBASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 ATP5JP1-201ENST00000431631 322 ntBASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 AC005002.1-201ENST00000447458 540 ntBASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 AC233982.1-201ENST00000451247 436 ntBASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 SNORA84-201ENST00000459229 133 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms