Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 AC034229.5-201ENST00000624258 185 ntBASIC4.41□□□□□ -1.7
VPS4AQ9UN37 AL359740.1-201ENST00000624340 592 ntBASIC4.41□□□□□ -1.7
VPS4AQ9UN37 AC011944.2-201ENST00000624440 683 ntBASIC4.41□□□□□ -1.7
VPS4AQ9UN37 AC008785.1-201ENST00000624475 456 ntBASIC4.41□□□□□ -1.7
VPS4AQ9UN37 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.41□□□□□ -1.7
VPS4AQ9UN37 AC025048.6-202ENST00000627667 438 ntBASIC4.41□□□□□ -1.7
VPS4AQ9UN37 PABPC1P9-201ENST00000426076 1612 ntBASIC4.41□□□□□ -1.7
VPS4AQ9UN37 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
VPS4AQ9UN37 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
VPS4AQ9UN37 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VPS4AQ9UN37 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
VPS4AQ9UN37 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.41□□□□□ -1.7
VPS4AQ9UN37 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.41□□□□□ -1.7
VPS4AQ9UN37 AC097504.1-201ENST00000515103 2415 ntBASIC4.41□□□□□ -1.7
VPS4AQ9UN37 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
VPS4AQ9UN37 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VPS4AQ9UN37 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
VPS4AQ9UN37 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
VPS4AQ9UN37 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
VPS4AQ9UN37 AL031985.3-201ENST00000565390 2449 ntBASIC4.4□□□□□ -1.7
VPS4AQ9UN37 AL592148.3-201ENST00000608771 2646 ntBASIC4.4□□□□□ -1.7
VPS4AQ9UN37 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.4□□□□□ -1.71
VPS4AQ9UN37 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
VPS4AQ9UN37 RNA5SP502-201ENST00000362694 119 ntBASIC4.4□□□□□ -1.71
VPS4AQ9UN37 RNU1-20P-201ENST00000363314 162 ntBASIC4.4□□□□□ -1.71
VPS4AQ9UN37 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
VPS4AQ9UN37 AC083875.1-201ENST00000419509 405 ntBASIC4.4□□□□□ -1.71
VPS4AQ9UN37 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.4□□□□□ -1.71
VPS4AQ9UN37 AL732292.1-201ENST00000426692 226 ntBASIC4.4□□□□□ -1.71
VPS4AQ9UN37 AC096632.1-201ENST00000427395 310 ntBASIC4.4□□□□□ -1.71
VPS4AQ9UN37 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS4AQ9UN37 MTND1P34-201ENST00000438556 671 ntBASIC4.4□□□□□ -1.71
VPS4AQ9UN37 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.4□□□□□ -1.71
VPS4AQ9UN37 HMGB3P21-201ENST00000452483 547 ntBASIC4.4□□□□□ -1.71
VPS4AQ9UN37 AC091564.1-201ENST00000464563 479 ntBASIC4.4□□□□□ -1.71
VPS4AQ9UN37 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.4□□□□□ -1.71
VPS4AQ9UN37 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.4□□□□□ -1.71
VPS4AQ9UN37 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS4AQ9UN37 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VPS4AQ9UN37 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.4□□□□□ -1.71
VPS4AQ9UN37 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS4AQ9UN37 AC015795.1-201ENST00000513669 327 ntBASIC4.4□□□□□ -1.71
VPS4AQ9UN37 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.4□□□□□ -1.71
VPS4AQ9UN37 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VPS4AQ9UN37 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS4AQ9UN37 HSPA8P13-201ENST00000523715 472 ntBASIC4.4□□□□□ -1.71
VPS4AQ9UN37 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS4AQ9UN37 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS4AQ9UN37 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS4AQ9UN37 AC091489.2-201ENST00000566263 604 ntBASIC4.4□□□□□ -1.71
VPS4AQ9UN37 AC007599.1-201ENST00000568688 1174 ntBASIC4.4□□□□□ -1.71
VPS4AQ9UN37 MIR3939-201ENST00000582614 106 ntBASIC4.4□□□□□ -1.71
VPS4AQ9UN37 AC091178.1-203ENST00000584586 279 ntBASIC4.4□□□□□ -1.71
VPS4AQ9UN37 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.4□□□□□ -1.71
VPS4AQ9UN37 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS4AQ9UN37 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.4□□□□□ -1.71
VPS4AQ9UN37 AC022146.1-201ENST00000595307 847 ntBASIC4.4□□□□□ -1.71
VPS4AQ9UN37 AC115286.1-201ENST00000604298 434 ntBASIC4.4□□□□□ -1.71
VPS4AQ9UN37 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS4AQ9UN37 AC010678.1-201ENST00000614118 713 ntBASIC4.4□□□□□ -1.71
VPS4AQ9UN37 AC026368.1-201ENST00000614934 690 ntBASIC4.4□□□□□ -1.71
VPS4AQ9UN37 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.4□□□□□ -1.71
VPS4AQ9UN37 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.4□□□□□ -1.71
VPS4AQ9UN37 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.4□□□□□ -1.71
VPS4AQ9UN37 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VPS4AQ9UN37 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.4□□□□□ -1.71
VPS4AQ9UN37 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.4□□□□□ -1.71
VPS4AQ9UN37 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS4AQ9UN37 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS4AQ9UN37 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS4AQ9UN37 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS4AQ9UN37 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
VPS4AQ9UN37 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
VPS4AQ9UN37 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS4AQ9UN37 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
VPS4AQ9UN37 FGF7P2-201ENST00000332473 296 ntBASIC4.39□□□□□ -1.71
VPS4AQ9UN37 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
VPS4AQ9UN37 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS4AQ9UN37 AL359837.1-201ENST00000381357 287 ntBASIC4.39□□□□□ -1.71
VPS4AQ9UN37 RNY3P10-201ENST00000384764 102 ntBASIC4.39□□□□□ -1.71
VPS4AQ9UN37 AC025750.1-201ENST00000399891 379 ntBASIC4.39□□□□□ -1.71
VPS4AQ9UN37 HDGFP1-201ENST00000405943 252 ntBASIC4.39□□□□□ -1.71
VPS4AQ9UN37 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS4AQ9UN37 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS4AQ9UN37 AC004448.2-201ENST00000422360 586 ntBASIC4.39□□□□□ -1.71
VPS4AQ9UN37 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS4AQ9UN37 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS4AQ9UN37 MTND1P28-201ENST00000435623 950 ntBASIC4.39□□□□□ -1.71
VPS4AQ9UN37 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS4AQ9UN37 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS4AQ9UN37 MTCO1P27-201ENST00000448269 226 ntBASIC4.39□□□□□ -1.71
VPS4AQ9UN37 ARPC3P5-201ENST00000448802 534 ntBASIC4.39□□□□□ -1.71
VPS4AQ9UN37 TRBV26-201ENST00000456572 344 ntBASIC4.39□□□□□ -1.71
VPS4AQ9UN37 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS4AQ9UN37 snoU13.7-201ENST00000459220 104 ntBASIC4.39□□□□□ -1.71
VPS4AQ9UN37 AC026410.2-201ENST00000460281 156 ntBASIC4.39□□□□□ -1.71
VPS4AQ9UN37 AC087879.1-201ENST00000474343 374 ntBASIC4.39□□□□□ -1.71
VPS4AQ9UN37 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS4AQ9UN37 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS4AQ9UN37 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 180.3 ms