Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SIX4Q9UIU6 SNORD116-9-201ENST00000384000 95 ntBASIC4.1□□□□□ -1.75
SIX4Q9UIU6 SNORD116-3-201ENST00000384287 95 ntBASIC4.1□□□□□ -1.75
SIX4Q9UIU6 SNORD116-7-201ENST00000384404 95 ntBASIC4.1□□□□□ -1.75
SIX4Q9UIU6 SNORD116-5-201ENST00000384462 95 ntBASIC4.1□□□□□ -1.75
SIX4Q9UIU6 AL121834.1-202ENST00000404494 277 ntBASIC4.1□□□□□ -1.75
SIX4Q9UIU6 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.1□□□□□ -1.75
SIX4Q9UIU6 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.1□□□□□ -1.75
SIX4Q9UIU6 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
SIX4Q9UIU6 ISCA1P2-201ENST00000438679 421 ntBASIC4.1□□□□□ -1.75
SIX4Q9UIU6 AC004865.1-201ENST00000442276 1003 ntBASIC4.1□□□□□ -1.75
SIX4Q9UIU6 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.1□□□□□ -1.75
SIX4Q9UIU6 HMGB3P22-202ENST00000451823 572 ntBASIC4.1□□□□□ -1.75
SIX4Q9UIU6 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.1□□□□□ -1.75
SIX4Q9UIU6 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.1□□□□□ -1.75
SIX4Q9UIU6 RPL37P3-201ENST00000456825 293 ntBASIC4.1□□□□□ -1.75
SIX4Q9UIU6 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.1□□□□□ -1.75
SIX4Q9UIU6 RN7SL542P-201ENST00000467147 294 ntBASIC4.1□□□□□ -1.75
SIX4Q9UIU6 SYPL1P1-201ENST00000473622 768 ntBASIC4.1□□□□□ -1.75
SIX4Q9UIU6 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SIX4Q9UIU6 RN7SL132P-201ENST00000478131 296 ntBASIC4.1□□□□□ -1.75
SIX4Q9UIU6 ACTG1P13-201ENST00000486987 1043 ntBASIC4.1□□□□□ -1.75
SIX4Q9UIU6 AC025445.1-201ENST00000502728 300 ntBASIC4.1□□□□□ -1.75
SIX4Q9UIU6 AC147055.4-201ENST00000504399 745 ntBASIC4.1□□□□□ -1.75
SIX4Q9UIU6 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.1□□□□□ -1.75
SIX4Q9UIU6 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.1□□□□□ -1.75
SIX4Q9UIU6 HNRNPKP5-201ENST00000515300 253 ntBASIC4.1□□□□□ -1.75
SIX4Q9UIU6 DEFB109D-201ENST00000529497 240 ntBASIC4.1□□□□□ -1.75
SIX4Q9UIU6 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.1□□□□□ -1.75
SIX4Q9UIU6 MTCYBP33-201ENST00000575007 1130 ntBASIC4.1□□□□□ -1.75
SIX4Q9UIU6 ISCA1P3-201ENST00000577104 373 ntBASIC4.1□□□□□ -1.75
SIX4Q9UIU6 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.1□□□□□ -1.75
SIX4Q9UIU6 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.1□□□□□ -1.75
SIX4Q9UIU6 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SIX4Q9UIU6 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.1□□□□□ -1.75
SIX4Q9UIU6 VN1R84P-201ENST00000593697 235 ntBASIC4.1□□□□□ -1.75
SIX4Q9UIU6 AL390838.2-201ENST00000602394 274 ntBASIC4.1□□□□□ -1.75
SIX4Q9UIU6 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.1□□□□□ -1.75
SIX4Q9UIU6 AL139395.1-201ENST00000603662 160 ntBASIC4.1□□□□□ -1.75
SIX4Q9UIU6 AC091488.1-201ENST00000604239 660 ntBASIC4.1□□□□□ -1.75
SIX4Q9UIU6 AC010738.1-201ENST00000604970 987 ntBASIC4.1□□□□□ -1.75
SIX4Q9UIU6 SNORA62.6-201ENST00000606322 83 ntBASIC4.1□□□□□ -1.75
SIX4Q9UIU6 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.1□□□□□ -1.75
SIX4Q9UIU6 AL158196.1-201ENST00000616786 434 ntBASIC4.1□□□□□ -1.75
SIX4Q9UIU6 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SIX4Q9UIU6 AC067931.1-201ENST00000624190 671 ntBASIC4.1□□□□□ -1.75
SIX4Q9UIU6 AP003072.4-201ENST00000624580 310 ntBASIC4.1□□□□□ -1.75
SIX4Q9UIU6 AC091965.5-201ENST00000624785 342 ntBASIC4.1□□□□□ -1.75
SIX4Q9UIU6 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SIX4Q9UIU6 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SIX4Q9UIU6 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SIX4Q9UIU6 AC021755.1-201ENST00000559747 1447 ntBASIC4.1□□□□□ -1.75
SIX4Q9UIU6 AC005539.1-201ENST00000443768 1479 ntBASIC4.1□□□□□ -1.75
SIX4Q9UIU6 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
SIX4Q9UIU6 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SIX4Q9UIU6 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.1□□□□□ -1.75
SIX4Q9UIU6 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
SIX4Q9UIU6 RNA5SP124-201ENST00000362739 110 ntBASIC4.09□□□□□ -1.75
SIX4Q9UIU6 RNU6-931P-201ENST00000363850 107 ntBASIC4.09□□□□□ -1.75
SIX4Q9UIU6 RNU6-621P-201ENST00000364752 109 ntBASIC4.09□□□□□ -1.75
SIX4Q9UIU6 Y_RNA.311-201ENST00000365068 96 ntBASIC4.09□□□□□ -1.75
SIX4Q9UIU6 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
SIX4Q9UIU6 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SIX4Q9UIU6 RNU6-1279P-201ENST00000383917 103 ntBASIC4.09□□□□□ -1.75
SIX4Q9UIU6 RNU6-1151P-201ENST00000384684 107 ntBASIC4.09□□□□□ -1.75
SIX4Q9UIU6 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SIX4Q9UIU6 RNU2-65P-201ENST00000410162 185 ntBASIC4.09□□□□□ -1.75
SIX4Q9UIU6 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SIX4Q9UIU6 SEPT2P1-201ENST00000419651 180 ntBASIC4.09□□□□□ -1.75
SIX4Q9UIU6 AL022400.1-201ENST00000423946 935 ntBASIC4.09□□□□□ -1.75
SIX4Q9UIU6 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.09□□□□□ -1.75
SIX4Q9UIU6 AL591419.1-201ENST00000427423 339 ntBASIC4.09□□□□□ -1.75
SIX4Q9UIU6 AL050321.1-201ENST00000432363 400 ntBASIC4.09□□□□□ -1.75
SIX4Q9UIU6 RPS26P40-201ENST00000435209 294 ntBASIC4.09□□□□□ -1.75
SIX4Q9UIU6 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.09□□□□□ -1.75
SIX4Q9UIU6 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.09□□□□□ -1.75
SIX4Q9UIU6 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.09□□□□□ -1.75
SIX4Q9UIU6 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.09□□□□□ -1.75
SIX4Q9UIU6 AC097262.1-201ENST00000452559 548 ntBASIC4.09□□□□□ -1.75
SIX4Q9UIU6 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.09□□□□□ -1.75
SIX4Q9UIU6 NF1P3-201ENST00000457709 450 ntBASIC4.09□□□□□ -1.75
SIX4Q9UIU6 TPTE2P5-203ENST00000458118 728 ntBASIC4.09□□□□□ -1.75
SIX4Q9UIU6 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.09□□□□□ -1.75
SIX4Q9UIU6 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.75
SIX4Q9UIU6 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.09□□□□□ -1.75
SIX4Q9UIU6 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.09□□□□□ -1.75
SIX4Q9UIU6 XKRY-201ENST00000510392 1100 ntBASIC4.09□□□□□ -1.75
SIX4Q9UIU6 MTND4LP31-201ENST00000514859 294 ntBASIC4.09□□□□□ -1.75
SIX4Q9UIU6 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SIX4Q9UIU6 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.09□□□□□ -1.75
SIX4Q9UIU6 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.09□□□□□ -1.75
SIX4Q9UIU6 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.09□□□□□ -1.75
SIX4Q9UIU6 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.09□□□□□ -1.75
SIX4Q9UIU6 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.09□□□□□ -1.75
SIX4Q9UIU6 AC034105.4-201ENST00000568304 277 ntBASIC4.09□□□□□ -1.75
SIX4Q9UIU6 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.09□□□□□ -1.75
SIX4Q9UIU6 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SIX4Q9UIU6 AL592221.1-201ENST00000605266 382 ntBASIC4.09□□□□□ -1.75
SIX4Q9UIU6 AC105129.3-201ENST00000605455 485 ntBASIC4.09□□□□□ -1.75
SIX4Q9UIU6 RNU1-30P-201ENST00000606575 163 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms