Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LIMD1Q9UGP4 AC009120.2-204ENST00000621548 2032 ntBASIC6.49□□□□□ -1.37
LIMD1Q9UGP4 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 AC025809.2-201ENST00000625085 1802 ntBASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 AC000374.1-201ENST00000434698 1745 ntBASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 RBMY1HP-201ENST00000382759 1389 ntBASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 Y_RNA.2-201ENST00000362330 96 ntBASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 RNU6-339P-201ENST00000384310 107 ntBASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 RNU2-3P-201ENST00000410144 191 ntBASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 RNA5SP156-201ENST00000410250 110 ntBASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 AC245096.1-201ENST00000413104 546 ntBASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 SDHDP6-201ENST00000414693 480 ntBASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 AMMECR1LP1-201ENST00000415152 841 ntBASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 EIF4EP1-201ENST00000422311 642 ntBASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 BX323845.3-201ENST00000428215 527 ntBASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 CEP57L1P1-201ENST00000430943 1201 ntBASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 CEACAMP4-201ENST00000457676 421 ntBASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 RN7SL561P-201ENST00000488553 281 ntBASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 AC090958.1-201ENST00000511122 351 ntBASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 AP000859.1-201ENST00000525536 307 ntBASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 OR10G5P-201ENST00000532733 358 ntBASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 AL049779.3-201ENST00000557141 606 ntBASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 AC011494.1-201ENST00000596454 237 ntBASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 AL158032.1-201ENST00000605401 106 ntBASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 AL021879.1-201ENST00000611756 288 ntBASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 AL161423.1-201ENST00000613700 262 ntBASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 AL138825.1-201ENST00000618587 192 ntBASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 AC067931.1-201ENST00000624190 671 ntBASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LIMD1Q9UGP4 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 AC007842.1-201ENST00000597336 2039 ntBASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 HSP90AA5P-201ENST00000438353 2192 ntBASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 RNU6-874P-201ENST00000362390 105 ntBASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 RNU1-46P-201ENST00000384425 164 ntBASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 RNU6-823P-201ENST00000391042 103 ntBASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 AL669831.1-202ENST00000428504 417 ntBASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 AL645568.3-201ENST00000433683 316 ntBASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 OR3D1P-201ENST00000438288 955 ntBASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 PPIAP21-201ENST00000464473 501 ntBASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 AC117503.1-201ENST00000472241 394 ntBASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 AC009901.1-201ENST00000506703 541 ntBASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 AC083906.1-201ENST00000509298 406 ntBASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 AC090151.1-201ENST00000520784 730 ntBASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 OR1F2P-201ENST00000570470 933 ntBASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 MIR4301-201ENST00000577203 66 ntBASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 MIR6793-201ENST00000612376 63 ntBASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 AL136228.1-201ENST00000622221 319 ntBASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 LDHA-225ENST00000625635 141 ntTSL 5 BASIC6.47□□□□□ -1.37
LIMD1Q9UGP4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms