Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHRNA9Q9UGM1 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 RNU6-989P-201ENST00000362756 107 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 RNU6-1066P-201ENST00000363573 105 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 RNU6-263P-201ENST00000363811 107 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 RN7SKP280-201ENST00000364196 304 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 OR6K3-202ENST00000368146 996 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 DEFB109C-201ENST00000382575 264 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 DEFB109B-201ENST00000382656 264 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 MIR217-201ENST00000384817 110 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 MIR591-201ENST00000385290 95 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 HMGB3P23-201ENST00000414981 585 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 AC027644.1-201ENST00000419595 298 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 AL139247.1-201ENST00000422768 325 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 Z93242.1-201ENST00000427102 353 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 AC127537.2-201ENST00000439258 465 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 HMGB1P15-201ENST00000453854 435 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 AC099563.1-201ENST00000456086 418 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 U3.44-201ENST00000458938 192 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 AL133162.1-201ENST00000463228 453 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 RPL21P18-201ENST00000469899 480 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 AC108078.3-201ENST00000502633 489 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 AC084024.2-201ENST00000503480 791 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 AC105914.1-201ENST00000511798 226 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 OR7E13P-201ENST00000526052 910 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 AL121766.1-201ENST00000547436 487 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 MIR4474-201ENST00000579189 78 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 MIR5187-201ENST00000583479 76 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 KLKP1-201ENST00000595979 403 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 RPL23AP92-201ENST00000603609 255 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 AC055876.5-201ENST00000605667 259 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 AC006329.2-201ENST00000611491 394 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 AL590240.3-201ENST00000621416 943 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 AL360181.4-201ENST00000621752 134 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 AC139713.2-210ENST00000641741 992 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 CEP170P1-201ENST00000502249 4587 ntBASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CHRNA9Q9UGM1 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CHRNA9Q9UGM1 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.36□□□□□ -1.87
CHRNA9Q9UGM1 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CHRNA9Q9UGM1 AC005183.1-201ENST00000603687 1979 ntBASIC3.36□□□□□ -1.87
CHRNA9Q9UGM1 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CHRNA9Q9UGM1 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CHRNA9Q9UGM1 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CHRNA9Q9UGM1 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.36□□□□□ -1.87
CHRNA9Q9UGM1 SNORA63.3-201ENST00000362682 132 ntBASIC3.36□□□□□ -1.87
CHRNA9Q9UGM1 RNU6-283P-201ENST00000364788 107 ntBASIC3.36□□□□□ -1.87
CHRNA9Q9UGM1 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CHRNA9Q9UGM1 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CHRNA9Q9UGM1 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.36□□□□□ -1.87
CHRNA9Q9UGM1 RPL7P27-201ENST00000403775 720 ntBASIC3.36□□□□□ -1.87
CHRNA9Q9UGM1 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
CHRNA9Q9UGM1 AC002075.2-201ENST00000425207 252 ntBASIC3.36□□□□□ -1.87
CHRNA9Q9UGM1 DUTP6-201ENST00000425573 462 ntBASIC3.36□□□□□ -1.87
CHRNA9Q9UGM1 NDUFB1P1-201ENST00000435191 180 ntBASIC3.36□□□□□ -1.87
CHRNA9Q9UGM1 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.36□□□□□ -1.87
CHRNA9Q9UGM1 MTND2P19-201ENST00000449129 1012 ntBASIC3.36□□□□□ -1.87
CHRNA9Q9UGM1 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.36□□□□□ -1.87
CHRNA9Q9UGM1 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.36□□□□□ -1.87
CHRNA9Q9UGM1 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CHRNA9Q9UGM1 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.36□□□□□ -1.87
CHRNA9Q9UGM1 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.36□□□□□ -1.87
CHRNA9Q9UGM1 AC093767.1-201ENST00000504523 156 ntBASIC3.36□□□□□ -1.87
CHRNA9Q9UGM1 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.36□□□□□ -1.87
CHRNA9Q9UGM1 RNU6-885P-201ENST00000516607 104 ntBASIC3.36□□□□□ -1.87
CHRNA9Q9UGM1 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.36□□□□□ -1.87
CHRNA9Q9UGM1 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.36□□□□□ -1.87
CHRNA9Q9UGM1 AC019227.1-201ENST00000526902 510 ntBASIC3.36□□□□□ -1.87
CHRNA9Q9UGM1 AP001317.1-201ENST00000531194 960 ntBASIC3.36□□□□□ -1.87
CHRNA9Q9UGM1 AC092451.2-201ENST00000538746 658 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms