Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.65□□□□□ -1.67
DKK3Q9UBP4 MRPS10P2-201ENST00000431226 381 ntBASIC4.65□□□□□ -1.67
DKK3Q9UBP4 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.65□□□□□ -1.67
DKK3Q9UBP4 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.65□□□□□ -1.67
DKK3Q9UBP4 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.65□□□□□ -1.67
DKK3Q9UBP4 AC093392.2-201ENST00000450682 337 ntBASIC4.65□□□□□ -1.67
DKK3Q9UBP4 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.65□□□□□ -1.67
DKK3Q9UBP4 NDUFA5P7-201ENST00000452914 242 ntBASIC4.65□□□□□ -1.67
DKK3Q9UBP4 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.65□□□□□ -1.67
DKK3Q9UBP4 AC020593.1-201ENST00000507399 299 ntBASIC4.65□□□□□ -1.67
DKK3Q9UBP4 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.65□□□□□ -1.67
DKK3Q9UBP4 AC009643.1-201ENST00000532030 391 ntBASIC4.65□□□□□ -1.67
DKK3Q9UBP4 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.65□□□□□ -1.67
DKK3Q9UBP4 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.65□□□□□ -1.67
DKK3Q9UBP4 AC074029.1-201ENST00000552531 1044 ntBASIC4.65□□□□□ -1.67
DKK3Q9UBP4 AL161713.1-201ENST00000555538 145 ntBASIC4.65□□□□□ -1.67
DKK3Q9UBP4 AC069061.3-201ENST00000582254 823 ntBASIC4.65□□□□□ -1.67
DKK3Q9UBP4 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.65□□□□□ -1.67
DKK3Q9UBP4 NF1P5-201ENST00000588287 448 ntBASIC4.65□□□□□ -1.67
DKK3Q9UBP4 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.65□□□□□ -1.67
DKK3Q9UBP4 AC107214.2-201ENST00000608204 634 ntBASIC4.65□□□□□ -1.67
DKK3Q9UBP4 AC025588.4-201ENST00000615802 908 ntBASIC4.65□□□□□ -1.67
DKK3Q9UBP4 AC073534.2-201ENST00000620377 381 ntBASIC4.65□□□□□ -1.67
DKK3Q9UBP4 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
DKK3Q9UBP4 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
DKK3Q9UBP4 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
DKK3Q9UBP4 AC108467.2-201ENST00000617640 1597 ntBASIC4.65□□□□□ -1.67
DKK3Q9UBP4 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
DKK3Q9UBP4 AL136964.1-201ENST00000622038 2990 ntBASIC4.65□□□□□ -1.67
DKK3Q9UBP4 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
DKK3Q9UBP4 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.65□□□□□ -1.67
DKK3Q9UBP4 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.64□□□□□ -1.67
DKK3Q9UBP4 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.64□□□□□ -1.67
DKK3Q9UBP4 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.64□□□□□ -1.67
DKK3Q9UBP4 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
DKK3Q9UBP4 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
DKK3Q9UBP4 AC021146.4-201ENST00000309229 279 ntBASIC4.64□□□□□ -1.67
DKK3Q9UBP4 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
DKK3Q9UBP4 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
DKK3Q9UBP4 MIR1193-201ENST00000408109 78 ntBASIC4.64□□□□□ -1.67
DKK3Q9UBP4 AC073264.1-201ENST00000411508 416 ntBASIC4.64□□□□□ -1.67
DKK3Q9UBP4 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.64□□□□□ -1.67
DKK3Q9UBP4 RPS12P23-201ENST00000419579 400 ntBASIC4.64□□□□□ -1.67
DKK3Q9UBP4 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.64□□□□□ -1.67
DKK3Q9UBP4 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.64□□□□□ -1.67
DKK3Q9UBP4 UQCRBP1-201ENST00000421129 336 ntBASIC4.64□□□□□ -1.67
DKK3Q9UBP4 AC009237.2-201ENST00000421358 284 ntBASIC4.64□□□□□ -1.67
DKK3Q9UBP4 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.64□□□□□ -1.67
DKK3Q9UBP4 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.64□□□□□ -1.67
DKK3Q9UBP4 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.64□□□□□ -1.67
DKK3Q9UBP4 RPS26P40-201ENST00000435209 294 ntBASIC4.64□□□□□ -1.67
DKK3Q9UBP4 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.64□□□□□ -1.67
DKK3Q9UBP4 AC091862.1-201ENST00000438016 1100 ntBASIC4.64□□□□□ -1.67
DKK3Q9UBP4 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
DKK3Q9UBP4 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.64□□□□□ -1.67
DKK3Q9UBP4 ISCUP1-201ENST00000454451 448 ntBASIC4.64□□□□□ -1.67
DKK3Q9UBP4 snoU13.1-201ENST00000459157 104 ntBASIC4.64□□□□□ -1.67
DKK3Q9UBP4 OR9M1P-201ENST00000459641 921 ntBASIC4.64□□□□□ -1.67
DKK3Q9UBP4 FTH1P9-201ENST00000513251 355 ntBASIC4.64□□□□□ -1.67
DKK3Q9UBP4 MTCYBP43-201ENST00000513621 740 ntBASIC4.64□□□□□ -1.67
DKK3Q9UBP4 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.64□□□□□ -1.67
DKK3Q9UBP4 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.64□□□□□ -1.67
DKK3Q9UBP4 AP000827.1-201ENST00000527814 258 ntBASIC4.64□□□□□ -1.67
DKK3Q9UBP4 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.64□□□□□ -1.67
DKK3Q9UBP4 AL352979.3-201ENST00000553515 247 ntBASIC4.64□□□□□ -1.67
DKK3Q9UBP4 CYCSP2-201ENST00000558168 301 ntBASIC4.64□□□□□ -1.67
DKK3Q9UBP4 MIR4528-201ENST00000577763 90 ntBASIC4.64□□□□□ -1.67
DKK3Q9UBP4 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.64□□□□□ -1.67
DKK3Q9UBP4 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.64□□□□□ -1.67
DKK3Q9UBP4 AC093765.1-201ENST00000603758 881 ntBASIC4.64□□□□□ -1.67
DKK3Q9UBP4 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.64□□□□□ -1.67
DKK3Q9UBP4 AC126118.1-201ENST00000607744 628 ntBASIC4.64□□□□□ -1.67
DKK3Q9UBP4 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
DKK3Q9UBP4 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.64□□□□□ -1.67
DKK3Q9UBP4 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
DKK3Q9UBP4 AC108751.5-201ENST00000492880 1336 ntBASIC4.64□□□□□ -1.67
DKK3Q9UBP4 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.64□□□□□ -1.67
DKK3Q9UBP4 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
DKK3Q9UBP4 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.63□□□□□ -1.67
DKK3Q9UBP4 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.63□□□□□ -1.67
DKK3Q9UBP4 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
DKK3Q9UBP4 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.63□□□□□ -1.67
DKK3Q9UBP4 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
DKK3Q9UBP4 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
DKK3Q9UBP4 RNA5SP388-201ENST00000362584 119 ntBASIC4.63□□□□□ -1.67
DKK3Q9UBP4 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
DKK3Q9UBP4 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.63□□□□□ -1.67
DKK3Q9UBP4 RNU6-259P-201ENST00000383999 107 ntBASIC4.63□□□□□ -1.67
DKK3Q9UBP4 AL080315.1-201ENST00000406055 466 ntBASIC4.63□□□□□ -1.67
DKK3Q9UBP4 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.63□□□□□ -1.67
DKK3Q9UBP4 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.63□□□□□ -1.67
DKK3Q9UBP4 BMS1P19-201ENST00000433925 393 ntBASIC4.63□□□□□ -1.67
DKK3Q9UBP4 MTATP6P23-201ENST00000440153 476 ntBASIC4.63□□□□□ -1.67
DKK3Q9UBP4 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.63□□□□□ -1.67
DKK3Q9UBP4 ARL2BPP10-201ENST00000446487 531 ntBASIC4.63□□□□□ -1.67
DKK3Q9UBP4 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.63□□□□□ -1.67
DKK3Q9UBP4 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.63□□□□□ -1.67
DKK3Q9UBP4 SNRPFP4-201ENST00000456366 242 ntBASIC4.63□□□□□ -1.67
DKK3Q9UBP4 RPS7P7-201ENST00000463499 571 ntBASIC4.63□□□□□ -1.67
DKK3Q9UBP4 RPL21P129-201ENST00000491732 478 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms