Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
CHD7Q9P2D1 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CHD7Q9P2D1 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CHD7Q9P2D1 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CHD7Q9P2D1 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
CHD7Q9P2D1 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
CHD7Q9P2D1 AC107222.1-201ENST00000510899 637 ntBASIC2.61□□□□□ -1.99
CHD7Q9P2D1 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CHD7Q9P2D1 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
CHD7Q9P2D1 AC006539.3-201ENST00000454258 129 ntBASIC2.61□□□□□ -1.99
CHD7Q9P2D1 MTCYBP14-201ENST00000457471 715 ntBASIC2.61□□□□□ -1.99
CHD7Q9P2D1 ASNSP4-201ENST00000511103 447 ntBASIC2.61□□□□□ -1.99
CHD7Q9P2D1 AC021146.1-201ENST00000511202 716 ntBASIC2.61□□□□□ -1.99
CHD7Q9P2D1 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.61□□□□□ -1.99
CHD7Q9P2D1 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC2.61□□□□□ -1.99
CHD7Q9P2D1 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.61□□□□□ -1.99
CHD7Q9P2D1 AL365503.1-201ENST00000605247 905 ntBASIC2.61□□□□□ -1.99
CHD7Q9P2D1 LINC00901.1-201ENST00000617252 152 ntBASIC2.61□□□□□ -1.99
CHD7Q9P2D1 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
CHD7Q9P2D1 MIR489-201ENST00000384923 84 ntBASIC2.6□□□□□ -1.99
CHD7Q9P2D1 AC048351.1-201ENST00000420064 602 ntBASIC2.6□□□□□ -1.99
CHD7Q9P2D1 AP001086.1-201ENST00000494882 321 ntBASIC2.6□□□□□ -1.99
CHD7Q9P2D1 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.6□□□□□ -1.99
CHD7Q9P2D1 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.6□□□□□ -1.99
CHD7Q9P2D1 MIR8070-201ENST00000616510 88 ntBASIC2.6□□□□□ -1.99
CHD7Q9P2D1 RNU6-1159P-201ENST00000362933 107 ntBASIC2.6□□□□□ -1.99
CHD7Q9P2D1 AL023284.1-201ENST00000403956 276 ntBASIC2.6□□□□□ -1.99
CHD7Q9P2D1 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CHD7Q9P2D1 AC245517.4-201ENST00000448601 281 ntBASIC2.6□□□□□ -1.99
CHD7Q9P2D1 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.6□□□□□ -1.99
CHD7Q9P2D1 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.6□□□□□ -1.99
CHD7Q9P2D1 SETP1-201ENST00000556014 845 ntBASIC2.6□□□□□ -1.99
CHD7Q9P2D1 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.6□□□□□ -1.99
CHD7Q9P2D1 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CHD7Q9P2D1 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CHD7Q9P2D1 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.59□□□□□ -1.99
CHD7Q9P2D1 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.59□□□□□ -1.99
CHD7Q9P2D1 SNORA70E-201ENST00000384492 135 ntBASIC2.59□□□□□ -1.99
CHD7Q9P2D1 AC007064.1-201ENST00000412238 351 ntBASIC2.59□□□□□ -1.99
CHD7Q9P2D1 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC2.59□□□□□ -1.99
CHD7Q9P2D1 AL592437.1-201ENST00000443781 492 ntBASIC2.59□□□□□ -1.99
CHD7Q9P2D1 RPL30P9-201ENST00000465586 330 ntBASIC2.59□□□□□ -1.99
CHD7Q9P2D1 RN7SKP43-201ENST00000516173 320 ntBASIC2.59□□□□□ -1.99
CHD7Q9P2D1 AC245166.1-201ENST00000521012 253 ntBASIC2.59□□□□□ -1.99
CHD7Q9P2D1 AL355836.1-201ENST00000555951 870 ntBASIC2.59□□□□□ -1.99
CHD7Q9P2D1 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CHD7Q9P2D1 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.59□□□□□ -1.99
CHD7Q9P2D1 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CHD7Q9P2D1 AC093831.2-201ENST00000624393 3427 ntBASIC2.59□□□□□ -1.99
CHD7Q9P2D1 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC2.59□□□□□ -2
CHD7Q9P2D1 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.59□□□□□ -2
CHD7Q9P2D1 EI24P2-201ENST00000397776 1076 ntBASIC2.59□□□□□ -2
CHD7Q9P2D1 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.59□□□□□ -2
CHD7Q9P2D1 PRELID3BP7-201ENST00000503606 469 ntBASIC2.59□□□□□ -2
CHD7Q9P2D1 AC078814.3-201ENST00000553036 491 ntBASIC2.59□□□□□ -2
CHD7Q9P2D1 MIR3605-201ENST00000583214 100 ntBASIC2.59□□□□□ -2
CHD7Q9P2D1 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.59□□□□□ -2
CHD7Q9P2D1 AC067747.1-201ENST00000608026 250 ntBASIC2.59□□□□□ -2
CHD7Q9P2D1 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.59□□□□□ -2
CHD7Q9P2D1 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CHD7Q9P2D1 MIR148B-201ENST00000362252 99 ntBASIC2.58□□□□□ -2
CHD7Q9P2D1 USP9YP20-201ENST00000419224 558 ntBASIC2.58□□□□□ -2
CHD7Q9P2D1 AL024509.2-201ENST00000493462 493 ntBASIC2.58□□□□□ -2
CHD7Q9P2D1 AC026436.1-201ENST00000510537 270 ntBASIC2.58□□□□□ -2
CHD7Q9P2D1 OR8L1P-201ENST00000534005 955 ntBASIC2.58□□□□□ -2
CHD7Q9P2D1 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.58□□□□□ -2
CHD7Q9P2D1 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.58□□□□□ -2
CHD7Q9P2D1 Y_RNA.796-201ENST00000364268 102 ntBASIC2.58□□□□□ -2
CHD7Q9P2D1 Y_RNA.799-201ENST00000364992 102 ntBASIC2.58□□□□□ -2
CHD7Q9P2D1 BTG3P1-201ENST00000435859 716 ntBASIC2.58□□□□□ -2
CHD7Q9P2D1 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.58□□□□□ -2
CHD7Q9P2D1 AP004217.1-201ENST00000480579 346 ntBASIC2.58□□□□□ -2
CHD7Q9P2D1 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.58□□□□□ -2
CHD7Q9P2D1 AC128657.1-201ENST00000549459 145 ntBASIC2.58□□□□□ -2
CHD7Q9P2D1 AL109741.3-201ENST00000561748 592 ntBASIC2.58□□□□□ -2
CHD7Q9P2D1 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC2.58□□□□□ -2
CHD7Q9P2D1 AC005046.1-201ENST00000608515 625 ntBASIC2.58□□□□□ -2
CHD7Q9P2D1 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.58□□□□□ -2
CHD7Q9P2D1 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC2.58□□□□□ -2
CHD7Q9P2D1 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
CHD7Q9P2D1 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC2.58□□□□□ -2
CHD7Q9P2D1 MTCO3P11-201ENST00000455103 774 ntBASIC2.58□□□□□ -2
CHD7Q9P2D1 AC108729.3-201ENST00000513484 108 ntBASIC2.58□□□□□ -2
CHD7Q9P2D1 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.58□□□□□ -2
CHD7Q9P2D1 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC2.58□□□□□ -2
CHD7Q9P2D1 AL390334.1-201ENST00000556395 450 ntBASIC2.58□□□□□ -2
CHD7Q9P2D1 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC2.57□□□□□ -2
CHD7Q9P2D1 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.57□□□□□ -2
CHD7Q9P2D1 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CHD7Q9P2D1 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
CHD7Q9P2D1 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CHD7Q9P2D1 RPL21P3-201ENST00000395517 478 ntBASIC2.57□□□□□ -2
CHD7Q9P2D1 AL451074.5-201ENST00000415894 435 ntBASIC2.57□□□□□ -2
CHD7Q9P2D1 RPL21P41-201ENST00000459863 264 ntBASIC2.57□□□□□ -2
CHD7Q9P2D1 AC146507.2-201ENST00000460608 476 ntBASIC2.57□□□□□ -2
CHD7Q9P2D1 AP000942.1-201ENST00000463969 747 ntBASIC2.57□□□□□ -2
CHD7Q9P2D1 AC018630.1-201ENST00000541376 925 ntBASIC2.57□□□□□ -2
CHD7Q9P2D1 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC2.57□□□□□ -2
CHD7Q9P2D1 VN1R9P-201ENST00000614184 867 ntBASIC2.57□□□□□ -2
CHD7Q9P2D1 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms