Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
PARPBPQ9NWS1 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 Y_RNA.46-201ENST00000362695 102 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 RNU6-1322P-201ENST00000364309 107 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 UBBP2-201ENST00000376781 231 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 RNU1-39P-201ENST00000383897 165 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 Y_RNA.481-201ENST00000384373 102 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 RNU6-178P-201ENST00000384631 104 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 RPL32P23-201ENST00000397237 405 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 RPL7P25-201ENST00000404151 721 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 MIR1178-201ENST00000408396 91 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 AL590609.2-201ENST00000421430 368 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 AC007394.1-201ENST00000421941 531 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 COX6CP13-201ENST00000428703 226 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 AC010881.1-201ENST00000433830 235 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 SNRPEP7-201ENST00000438350 220 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 CBX1P1-201ENST00000440184 427 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 HMGB3P9-201ENST00000441799 583 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 CEACAMP7-201ENST00000444105 496 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 KNOP1P3-201ENST00000446933 426 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 AC091180.1-201ENST00000462104 372 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 AC023194.1-201ENST00000493084 308 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 RN7SL244P-201ENST00000493405 297 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 RNA5SP228-201ENST00000516232 133 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 AC008562.1-201ENST00000521763 330 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 BRD9P1-201ENST00000529855 560 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 AC092490.3-201ENST00000545370 572 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 AC009117.1-201ENST00000563948 554 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 AC037471.2-201ENST00000564941 598 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 LARP7P2-201ENST00000575306 125 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 MTCYBP13-201ENST00000578634 1093 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 AL359999.1-201ENST00000604513 294 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 AC024940.5-201ENST00000622889 474 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 AC100810.6-201ENST00000638068 285 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 ERCC6-202ENST00000374127 1782 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 THAP12P4-201ENST00000528321 2266 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 LINC00622-201ENST00000562811 1570 ntBASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.57□□□□□ -1.68
PARPBPQ9NWS1 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
PARPBPQ9NWS1 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.56□□□□□ -1.68
PARPBPQ9NWS1 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PARPBPQ9NWS1 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
PARPBPQ9NWS1 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.56□□□□□ -1.68
PARPBPQ9NWS1 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PARPBPQ9NWS1 C4BPAP1-201ENST00000415474 1893 ntBASIC4.56□□□□□ -1.68
PARPBPQ9NWS1 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
PARPBPQ9NWS1 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
PARPBPQ9NWS1 RPL23P2-201ENST00000320371 421 ntBASIC4.56□□□□□ -1.68
PARPBPQ9NWS1 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PARPBPQ9NWS1 MIR105-2-201ENST00000385083 81 ntBASIC4.56□□□□□ -1.68
PARPBPQ9NWS1 RPL21P67-201ENST00000402896 478 ntBASIC4.56□□□□□ -1.68
PARPBPQ9NWS1 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PARPBPQ9NWS1 RAB28P1-201ENST00000411517 641 ntBASIC4.56□□□□□ -1.68
PARPBPQ9NWS1 MTCO3P12-201ENST00000416718 547 ntBASIC4.56□□□□□ -1.68
PARPBPQ9NWS1 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.56□□□□□ -1.68
PARPBPQ9NWS1 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.56□□□□□ -1.68
PARPBPQ9NWS1 BX510359.3-201ENST00000422168 306 ntBASIC4.56□□□□□ -1.68
PARPBPQ9NWS1 EI24P4-201ENST00000423683 1078 ntBASIC4.56□□□□□ -1.68
PARPBPQ9NWS1 EIF1P3-201ENST00000423841 334 ntBASIC4.56□□□□□ -1.68
PARPBPQ9NWS1 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.56□□□□□ -1.68
PARPBPQ9NWS1 NANOGP6-201ENST00000429190 847 ntBASIC4.56□□□□□ -1.68
PARPBPQ9NWS1 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.56□□□□□ -1.68
PARPBPQ9NWS1 AL606489.2-201ENST00000433886 234 ntBASIC4.56□□□□□ -1.68
PARPBPQ9NWS1 AC024082.2-201ENST00000434771 238 ntBASIC4.56□□□□□ -1.68
PARPBPQ9NWS1 RPS15AP9-201ENST00000439856 381 ntBASIC4.56□□□□□ -1.68
PARPBPQ9NWS1 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.56□□□□□ -1.68
PARPBPQ9NWS1 RPL21P71-201ENST00000465598 459 ntBASIC4.56□□□□□ -1.68
PARPBPQ9NWS1 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms