Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 AC068769.1-201ENST00000474767 2426 ntBASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 AC009779.8-201ENST00000641684 4384 ntBASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 Y_RNA.29-201ENST00000362570 113 ntBASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 RNU6-562P-201ENST00000362731 107 ntBASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 U3.11-201ENST00000364476 212 ntBASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 Y_RNA.483-201ENST00000384380 101 ntBASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 SNORA77.2-201ENST00000408571 112 ntBASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 RPS17P17-201ENST00000419392 409 ntBASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 E2F6P2-201ENST00000420708 748 ntBASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 AC094019.1-201ENST00000434678 472 ntBASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 AC099799.1-201ENST00000439809 192 ntBASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 AL589765.3-201ENST00000446084 462 ntBASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 GAS5-223ENST00000452197 483 ntTSL 3 BASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 AL035090.1-201ENST00000454835 332 ntBASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 VPS25P1-201ENST00000455691 508 ntBASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 AC009963.3-201ENST00000458090 486 ntBASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 AL671862.1-201ENST00000515851 349 ntBASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 PYM1-205ENST00000547925 499 ntTSL 3 BASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 SETP2-201ENST00000553886 926 ntBASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 RN7SL802P-201ENST00000577858 299 ntBASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 AC006254.3-201ENST00000603353 884 ntBASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 SNORD58B-201ENST00000607313 66 ntBASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 MIR6768-201ENST00000610734 72 ntBASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
CUEDC1Q9NWM3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 ASNSP1-201ENST00000518311 1939 ntBASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 AC093849.1-201ENST00000563631 2209 ntBASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 RNA5SP346-201ENST00000363541 121 ntBASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 SNORD50B-201ENST00000364995 70 ntBASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 RNU6-1226P-201ENST00000384317 107 ntBASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 Y_RNA.477-201ENST00000384352 108 ntBASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 AC004386.1-201ENST00000393214 761 ntBASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 Y_RNA.594-201ENST00000410373 140 ntBASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 HMGN1P20-201ENST00000411849 300 ntBASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 AL359265.2-201ENST00000434367 631 ntBASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 AC096775.1-201ENST00000437724 448 ntBASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 SUMO2P3-201ENST00000438311 288 ntBASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 RPL21P2-201ENST00000440049 481 ntBASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 RPL21P133-201ENST00000443666 476 ntBASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 AL162388.1-201ENST00000450912 352 ntBASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 AC103987.1-201ENST00000473394 348 ntBASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 AC022493.2-201ENST00000506122 481 ntBASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 HIGD1AP13-201ENST00000509878 289 ntBASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 ZNF519P4-201ENST00000514008 125 ntBASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 Y_RNA.670-201ENST00000516255 105 ntBASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 RNU6-307P-201ENST00000516743 106 ntBASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 Y_RNA.703-201ENST00000516846 111 ntBASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.05□□□□□ -1.44
CUEDC1Q9NWM3 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms