Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 ZNF29P-201ENST00000225587 168 ntBASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 U1.1-201ENST00000384101 164 ntBASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 AL450338.1-201ENST00000407987 512 ntBASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 RNU2-15P-201ENST00000410692 191 ntBASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 RNU2-71P-201ENST00000411395 189 ntBASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 AL035246.1-201ENST00000433554 1255 ntBASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 AC084290.1-201ENST00000434995 374 ntBASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 FGF7P3-201ENST00000454645 303 ntBASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 SUMO2P2-201ENST00000456482 255 ntBASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 AC084198.1-201ENST00000477747 402 ntBASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 AC069499.1-201ENST00000489433 509 ntBASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 AP001086.1-201ENST00000494882 321 ntBASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 VWA8P1-201ENST00000510889 176 ntBASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 AC008837.2-201ENST00000513076 418 ntBASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 AC092593.2-201ENST00000513866 913 ntBASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 AL139174.1-201ENST00000531489 886 ntBASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 CBX3P5-201ENST00000552017 521 ntBASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 AL049838.1-201ENST00000563647 981 ntBASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 AL451074.6-201ENST00000608512 729 ntBASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 AC069209.1-201ENST00000619282 651 ntBASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 AL139089.1-201ENST00000620372 975 ntBASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 AC068787.1-201ENST00000623908 691 ntBASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 AC068724.3-201ENST00000625906 87 ntBASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 AL390862.1-201ENST00000635467 1469 ntBASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 AC106871.1-201ENST00000568324 3102 ntBASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 RNU6-600P-201ENST00000362524 99 ntBASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 RNA5SP235-201ENST00000365411 114 ntBASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 SNORD51-201ENST00000384320 80 ntBASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 HSPE1P26-201ENST00000405341 275 ntBASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 TIMM9P2-201ENST00000419324 266 ntBASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 AC099677.1-201ENST00000420575 175 ntBASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 GLRXP1-201ENST00000423261 334 ntBASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 NIPA2P1-201ENST00000426223 976 ntBASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 RPL21P66-201ENST00000426566 466 ntBASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 MTND2P5-201ENST00000432656 1006 ntBASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 SNORA71B-202ENST00000439232 272 ntBASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 AL500522.2-201ENST00000448562 343 ntBASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 AL009048.1-201ENST00000450437 298 ntBASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 snoU13.24-201ENST00000458998 104 ntBASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 WBP1LP4-201ENST00000505043 344 ntBASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 RAC1P2-201ENST00000511164 579 ntBASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 RNU6-1073P-201ENST00000517182 106 ntBASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 OR4P1P-201ENST00000530808 1136 ntBASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 AC022662.1-201ENST00000580252 331 ntBASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 MIR4697-201ENST00000582977 78 ntBASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 AL606490.9-201ENST00000603331 271 ntBASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 AC006213.4-201ENST00000616184 634 ntBASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 MIR6875-201ENST00000617506 72 ntBASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 LINC00561-201ENST00000565815 2738 ntBASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 LINC02471-203ENST00000641941 4752 ntBASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
BLOC1S4Q9NUP1 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 AL049780.3-201ENST00000624612 1583 ntBASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.29□□□□□ -1.72
BLOC1S4Q9NUP1 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 201.6 ms