Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
TREX1Q9NSU2 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TREX1Q9NSU2 NSRP1P1-201ENST00000444067 1693 ntBASIC3.16□□□□□ -1.9
TREX1Q9NSU2 AC011978.2-201ENST00000569835 2054 ntBASIC3.16□□□□□ -1.9
TREX1Q9NSU2 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TREX1Q9NSU2 ZNF90P1-201ENST00000480493 1951 ntBASIC3.16□□□□□ -1.9
TREX1Q9NSU2 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.16□□□□□ -1.9
TREX1Q9NSU2 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
TREX1Q9NSU2 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TREX1Q9NSU2 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.15□□□□□ -1.9
TREX1Q9NSU2 AC004925.1-201ENST00000624256 2706 ntBASIC3.15□□□□□ -1.9
TREX1Q9NSU2 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TREX1Q9NSU2 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.15□□□□□ -1.91
TREX1Q9NSU2 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
TREX1Q9NSU2 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
TREX1Q9NSU2 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TREX1Q9NSU2 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.15□□□□□ -1.91
TREX1Q9NSU2 RNU6-1181P-201ENST00000384191 106 ntBASIC3.15□□□□□ -1.91
TREX1Q9NSU2 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.15□□□□□ -1.91
TREX1Q9NSU2 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.15□□□□□ -1.91
TREX1Q9NSU2 DPPA2P1-201ENST00000428060 556 ntBASIC3.15□□□□□ -1.91
TREX1Q9NSU2 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.15□□□□□ -1.91
TREX1Q9NSU2 AC005326.1-201ENST00000429197 123 ntBASIC3.15□□□□□ -1.91
TREX1Q9NSU2 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.15□□□□□ -1.91
TREX1Q9NSU2 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.15□□□□□ -1.91
TREX1Q9NSU2 AL050321.1-201ENST00000432363 400 ntBASIC3.15□□□□□ -1.91
TREX1Q9NSU2 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.15□□□□□ -1.91
TREX1Q9NSU2 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.15□□□□□ -1.91
TREX1Q9NSU2 HMGB3P6-201ENST00000444896 598 ntBASIC3.15□□□□□ -1.91
TREX1Q9NSU2 HMGB1P48-201ENST00000446155 598 ntBASIC3.15□□□□□ -1.91
TREX1Q9NSU2 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.15□□□□□ -1.91
TREX1Q9NSU2 AC093278.1-201ENST00000494700 600 ntBASIC3.15□□□□□ -1.91
TREX1Q9NSU2 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.15□□□□□ -1.91
TREX1Q9NSU2 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.15□□□□□ -1.91
TREX1Q9NSU2 DUXAP2-201ENST00000519198 589 ntBASIC3.15□□□□□ -1.91
TREX1Q9NSU2 AC245166.1-201ENST00000521012 253 ntBASIC3.15□□□□□ -1.91
TREX1Q9NSU2 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.15□□□□□ -1.91
TREX1Q9NSU2 AP001207.1-201ENST00000524051 481 ntBASIC3.15□□□□□ -1.91
TREX1Q9NSU2 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.15□□□□□ -1.91
TREX1Q9NSU2 CKS1BP1-201ENST00000555221 240 ntBASIC3.15□□□□□ -1.91
TREX1Q9NSU2 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
TREX1Q9NSU2 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.15□□□□□ -1.91
TREX1Q9NSU2 AC025016.1-201ENST00000616746 682 ntBASIC3.15□□□□□ -1.91
TREX1Q9NSU2 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
TREX1Q9NSU2 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.15□□□□□ -1.91
TREX1Q9NSU2 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.15□□□□□ -1.91
TREX1Q9NSU2 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.15□□□□□ -1.91
TREX1Q9NSU2 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TREX1Q9NSU2 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
TREX1Q9NSU2 MAPK10-362ENST00000641864 4484 ntBASIC3.15□□□□□ -1.91
TREX1Q9NSU2 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TREX1Q9NSU2 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.14□□□□□ -1.91
TREX1Q9NSU2 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.14□□□□□ -1.91
TREX1Q9NSU2 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TREX1Q9NSU2 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
TREX1Q9NSU2 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
TREX1Q9NSU2 SNORA71.3-201ENST00000362582 128 ntBASIC3.14□□□□□ -1.91
TREX1Q9NSU2 SNORD51.1-201ENST00000365405 77 ntBASIC3.14□□□□□ -1.91
TREX1Q9NSU2 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TREX1Q9NSU2 RNU6-1293P-201ENST00000384077 107 ntBASIC3.14□□□□□ -1.91
TREX1Q9NSU2 SNORA7.4-201ENST00000384249 137 ntBASIC3.14□□□□□ -1.91
TREX1Q9NSU2 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
TREX1Q9NSU2 AL354719.1-201ENST00000406535 843 ntBASIC3.14□□□□□ -1.91
TREX1Q9NSU2 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.14□□□□□ -1.91
TREX1Q9NSU2 RPS3AP25-201ENST00000411660 793 ntBASIC3.14□□□□□ -1.91
TREX1Q9NSU2 AC007899.1-201ENST00000412776 775 ntBASIC3.14□□□□□ -1.91
TREX1Q9NSU2 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.14□□□□□ -1.91
TREX1Q9NSU2 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.14□□□□□ -1.91
TREX1Q9NSU2 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TREX1Q9NSU2 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.14□□□□□ -1.91
TREX1Q9NSU2 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.14□□□□□ -1.91
TREX1Q9NSU2 AC108734.1-201ENST00000439549 399 ntBASIC3.14□□□□□ -1.91
TREX1Q9NSU2 RPL6P5-201ENST00000445678 828 ntBASIC3.14□□□□□ -1.91
TREX1Q9NSU2 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.14□□□□□ -1.91
TREX1Q9NSU2 RPL21P129-201ENST00000491732 478 ntBASIC3.14□□□□□ -1.91
TREX1Q9NSU2 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.14□□□□□ -1.91
TREX1Q9NSU2 AC008494.2-201ENST00000514544 370 ntBASIC3.14□□□□□ -1.91
TREX1Q9NSU2 CIR1P1-201ENST00000524055 1133 ntBASIC3.14□□□□□ -1.91
TREX1Q9NSU2 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.14□□□□□ -1.91
TREX1Q9NSU2 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.14□□□□□ -1.91
TREX1Q9NSU2 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.14□□□□□ -1.91
TREX1Q9NSU2 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.14□□□□□ -1.91
TREX1Q9NSU2 BNIP3P33-201ENST00000598912 569 ntBASIC3.14□□□□□ -1.91
TREX1Q9NSU2 AC079610.2-201ENST00000604818 690 ntBASIC3.14□□□□□ -1.91
TREX1Q9NSU2 AL451074.6-201ENST00000608512 729 ntBASIC3.14□□□□□ -1.91
TREX1Q9NSU2 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.14□□□□□ -1.91
TREX1Q9NSU2 AL359535.1-201ENST00000612100 1087 ntBASIC3.14□□□□□ -1.91
TREX1Q9NSU2 AC138932.5-201ENST00000617759 563 ntBASIC3.14□□□□□ -1.91
TREX1Q9NSU2 RNU6-156P-201ENST00000621869 107 ntBASIC3.14□□□□□ -1.91
TREX1Q9NSU2 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TREX1Q9NSU2 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TREX1Q9NSU2 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TREX1Q9NSU2 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TREX1Q9NSU2 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
TREX1Q9NSU2 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TREX1Q9NSU2 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.13□□□□□ -1.91
TREX1Q9NSU2 OR1S2-201ENST00000302592 978 ntBASIC3.13□□□□□ -1.91
TREX1Q9NSU2 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TREX1Q9NSU2 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TREX1Q9NSU2 SNORA46-201ENST00000384762 135 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms