Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 KLRA1P-201ENST00000503499 986 ntBASIC5.43□□□□□ -1.54
PDLIM7Q9NR12 RNU6-1281P-201ENST00000516223 105 ntBASIC5.43□□□□□ -1.54
PDLIM7Q9NR12 RNA5SP230-201ENST00000517039 122 ntBASIC5.43□□□□□ -1.54
PDLIM7Q9NR12 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC5.43□□□□□ -1.54
PDLIM7Q9NR12 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PDLIM7Q9NR12 AP000790.1-201ENST00000528891 737 ntBASIC5.43□□□□□ -1.54
PDLIM7Q9NR12 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.43□□□□□ -1.54
PDLIM7Q9NR12 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.43□□□□□ -1.54
PDLIM7Q9NR12 NRBF2P5-201ENST00000603087 788 ntBASIC5.43□□□□□ -1.54
PDLIM7Q9NR12 AC012507.3-201ENST00000603556 477 ntBASIC5.43□□□□□ -1.54
PDLIM7Q9NR12 BNIP3P11-201ENST00000603878 563 ntBASIC5.43□□□□□ -1.54
PDLIM7Q9NR12 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.43□□□□□ -1.54
PDLIM7Q9NR12 AC135507.2-201ENST00000612443 309 ntBASIC5.43□□□□□ -1.54
PDLIM7Q9NR12 AC009233.1-201ENST00000616477 371 ntBASIC5.43□□□□□ -1.54
PDLIM7Q9NR12 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PDLIM7Q9NR12 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDLIM7Q9NR12 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PDLIM7Q9NR12 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PDLIM7Q9NR12 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PDLIM7Q9NR12 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDLIM7Q9NR12 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.43□□□□□ -1.54
PDLIM7Q9NR12 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PDLIM7Q9NR12 AC011755.1-201ENST00000623763 2049 ntBASIC5.43□□□□□ -1.54
PDLIM7Q9NR12 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.43□□□□□ -1.54
PDLIM7Q9NR12 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PDLIM7Q9NR12 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.43□□□□□ -1.54
PDLIM7Q9NR12 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDLIM7Q9NR12 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 AC008758.3-201ENST00000507003 1829 ntBASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 RNU6-289P-201ENST00000364093 107 ntBASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 RNU6-769P-201ENST00000384407 104 ntBASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 MIR23B-201ENST00000384832 97 ntBASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 U3.30-201ENST00000391308 210 ntBASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 USP9YP20-201ENST00000419224 558 ntBASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 FABP7P1-201ENST00000424004 391 ntBASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 RPL35P6-201ENST00000490024 372 ntBASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 PANCR-202ENST00000513690 448 ntTSL 2 BASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 AC125611.2-201ENST00000551907 647 ntBASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 AL845331.3-202ENST00000562856 261 ntBASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 MTCO3P13-201ENST00000577757 781 ntBASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 MIR4637-201ENST00000582405 84 ntBASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 TPMTP1-201ENST00000592307 737 ntBASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 AC245014.2-201ENST00000603689 287 ntBASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 AL391646.1-201ENST00000603860 190 ntBASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 AC246785.4-201ENST00000605374 287 ntBASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 AC011816.2-201ENST00000607089 556 ntBASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 VPS8-228ENST00000628962 207 ntTSL 5 BASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDLIM7Q9NR12 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 AC022893.2-201ENST00000564832 3296 ntBASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 SNORA37-201ENST00000384504 129 ntBASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 MIR1305-201ENST00000408300 86 ntBASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 AC114755.2-201ENST00000413520 361 ntBASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 AC233981.1-201ENST00000423224 461 ntBASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 AL445669.1-201ENST00000426743 755 ntBASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 NANOGP6-201ENST00000429190 847 ntBASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 RPL31P35-201ENST00000431058 377 ntBASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 CYCSP24-201ENST00000445119 316 ntBASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 AC239809.1-201ENST00000450470 217 ntBASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 RPL21P71-201ENST00000465598 459 ntBASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 AC006390.1-201ENST00000508068 283 ntBASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 ARL2BPP2-201ENST00000550907 489 ntBASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 AC006349.1-201ENST00000555526 235 ntBASIC5.41□□□□□ -1.54
PDLIM7Q9NR12 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms