Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.07□□□□□ -1.76
PCDH9Q9HC56 AC012435.1-202ENST00000568772 240 ntBASIC4.07□□□□□ -1.76
PCDH9Q9HC56 AC002400.1-201ENST00000569310 726 ntBASIC4.07□□□□□ -1.76
PCDH9Q9HC56 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.07□□□□□ -1.76
PCDH9Q9HC56 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDH9Q9HC56 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.07□□□□□ -1.76
PCDH9Q9HC56 AC015726.1-201ENST00000602353 681 ntBASIC4.07□□□□□ -1.76
PCDH9Q9HC56 AL592221.1-201ENST00000605266 382 ntBASIC4.07□□□□□ -1.76
PCDH9Q9HC56 AC006270.3-201ENST00000605967 1036 ntBASIC4.07□□□□□ -1.76
PCDH9Q9HC56 AC245008.1-201ENST00000608123 476 ntBASIC4.07□□□□□ -1.76
PCDH9Q9HC56 AL354976.1-201ENST00000613843 387 ntBASIC4.07□□□□□ -1.76
PCDH9Q9HC56 AL392048.1-201ENST00000613946 534 ntBASIC4.07□□□□□ -1.76
PCDH9Q9HC56 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.07□□□□□ -1.76
PCDH9Q9HC56 AC243756.2-201ENST00000618406 463 ntBASIC4.07□□□□□ -1.76
PCDH9Q9HC56 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDH9Q9HC56 AC007494.3-201ENST00000624660 743 ntBASIC4.07□□□□□ -1.76
PCDH9Q9HC56 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.07□□□□□ -1.76
PCDH9Q9HC56 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.07□□□□□ -1.76
PCDH9Q9HC56 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
PCDH9Q9HC56 AC008725.1-201ENST00000605123 2263 ntBASIC4.07□□□□□ -1.76
PCDH9Q9HC56 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PCDH9Q9HC56 DBF4P1-201ENST00000412976 1892 ntBASIC4.07□□□□□ -1.76
PCDH9Q9HC56 NCAPGP1-201ENST00000505112 1814 ntBASIC4.07□□□□□ -1.76
PCDH9Q9HC56 FAM35DP-201ENST00000323387 2712 ntBASIC4.07□□□□□ -1.76
PCDH9Q9HC56 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDH9Q9HC56 RLIMP1-201ENST00000339626 1680 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AC095050.2-201ENST00000510748 1458 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 RNA5SP399-201ENST00000364003 117 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 SUGT1P1-201ENST00000379514 476 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 RNU1-13P-201ENST00000384499 162 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 Y_RNA.560-201ENST00000384689 102 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 RNU6-253P-201ENST00000384730 105 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 HMGN2P8-201ENST00000391458 268 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 MTCO3P31-201ENST00000405526 789 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AC068533.2-201ENST00000411872 306 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AC092634.6-201ENST00000418558 192 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AC016907.1-201ENST00000419483 435 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AC009237.2-201ENST00000421358 284 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AL022400.1-201ENST00000423946 935 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 RPL30P3-201ENST00000424262 333 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AL031736.2-201ENST00000426573 787 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 RPS27AP12-201ENST00000429552 465 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AC091390.1-201ENST00000433904 331 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AL606662.1-201ENST00000445763 553 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.06□□□□□ -1.76
PCDH9Q9HC56 RSL24D1P3-201ENST00000449255 495 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.06□□□□□ -1.76
PCDH9Q9HC56 RN7SL860P-201ENST00000473738 223 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AL132838.2-201ENST00000492041 314 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.06□□□□□ -1.76
PCDH9Q9HC56 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.06□□□□□ -1.76
PCDH9Q9HC56 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AC117532.1-201ENST00000514638 323 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.06□□□□□ -1.76
PCDH9Q9HC56 RNY4P37-201ENST00000516225 96 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AC022790.1-201ENST00000522872 204 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.06□□□□□ -1.76
PCDH9Q9HC56 RFPL1S-203ENST00000539579 330 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.06□□□□□ -1.76
PCDH9Q9HC56 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.06□□□□□ -1.76
PCDH9Q9HC56 EIF5A2P1-201ENST00000564027 460 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 ISCA1P3-201ENST00000577104 373 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.06□□□□□ -1.76
PCDH9Q9HC56 MIR4697-201ENST00000582977 78 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 NF1P5-201ENST00000588287 448 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.06□□□□□ -1.76
PCDH9Q9HC56 VN1R90P-201ENST00000595717 726 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AC010738.1-201ENST00000604970 987 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 HSPE1P14-201ENST00000605812 302 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AC064807.4-201ENST00000607201 407 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AC009090.3-201ENST00000616553 565 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AL136981.2-201ENST00000617319 734 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
PCDH9Q9HC56 AF246928.1-201ENST00000623768 87 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PCDH9Q9HC56 LINC00561-201ENST00000565815 2738 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
PCDH9Q9HC56 ELL2P3-201ENST00000457883 1602 ntBASIC4.06□□□□□ -1.76
PCDH9Q9HC56 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDH9Q9HC56 Y_RNA.25-201ENST00000362528 102 ntBASIC4.05□□□□□ -1.76
PCDH9Q9HC56 RNA5SP391-201ENST00000363456 119 ntBASIC4.05□□□□□ -1.76
PCDH9Q9HC56 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms