Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.32□□□□□ -1.72
CLPBQ9H078 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.32□□□□□ -1.72
CLPBQ9H078 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
CLPBQ9H078 AC106038.2-201ENST00000520706 568 ntBASIC4.32□□□□□ -1.72
CLPBQ9H078 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.32□□□□□ -1.72
CLPBQ9H078 OR5BC1P-201ENST00000529327 739 ntBASIC4.32□□□□□ -1.72
CLPBQ9H078 AC087276.1-201ENST00000529659 480 ntBASIC4.32□□□□□ -1.72
CLPBQ9H078 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.32□□□□□ -1.72
CLPBQ9H078 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.32□□□□□ -1.72
CLPBQ9H078 HNRNPCP4-201ENST00000571636 900 ntBASIC4.32□□□□□ -1.72
CLPBQ9H078 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.32□□□□□ -1.72
CLPBQ9H078 AC004223.2-201ENST00000590309 544 ntBASIC4.32□□□□□ -1.72
CLPBQ9H078 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.32□□□□□ -1.72
CLPBQ9H078 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.32□□□□□ -1.72
CLPBQ9H078 AC007566.2-201ENST00000603642 413 ntBASIC4.32□□□□□ -1.72
CLPBQ9H078 AL159169.3-201ENST00000608871 561 ntBASIC4.32□□□□□ -1.72
CLPBQ9H078 AL021997.2-201ENST00000615674 271 ntBASIC4.32□□□□□ -1.72
CLPBQ9H078 MIR7844-201ENST00000616161 122 ntBASIC4.32□□□□□ -1.72
CLPBQ9H078 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CLPBQ9H078 AC009318.4-201ENST00000620496 486 ntBASIC4.32□□□□□ -1.72
CLPBQ9H078 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.32□□□□□ -1.72
CLPBQ9H078 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.32□□□□□ -1.72
CLPBQ9H078 AC068137.4-201ENST00000638485 296 ntBASIC4.32□□□□□ -1.72
CLPBQ9H078 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLPBQ9H078 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
CLPBQ9H078 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
CLPBQ9H078 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLPBQ9H078 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CLPBQ9H078 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLPBQ9H078 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CLPBQ9H078 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLPBQ9H078 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLPBQ9H078 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLPBQ9H078 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLPBQ9H078 GDI2P1-201ENST00000429312 1336 ntBASIC4.31□□□□□ -1.72
CLPBQ9H078 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLPBQ9H078 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.31□□□□□ -1.72
CLPBQ9H078 RNU1-15P-201ENST00000353977 144 ntBASIC4.31□□□□□ -1.72
CLPBQ9H078 RNU6-374P-201ENST00000364146 108 ntBASIC4.31□□□□□ -1.72
CLPBQ9H078 RNA5SP175-201ENST00000364275 119 ntBASIC4.31□□□□□ -1.72
CLPBQ9H078 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLPBQ9H078 RAC1P3-201ENST00000416129 580 ntBASIC4.31□□□□□ -1.72
CLPBQ9H078 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.31□□□□□ -1.72
CLPBQ9H078 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.31□□□□□ -1.72
CLPBQ9H078 EIF1P3-201ENST00000423841 334 ntBASIC4.31□□□□□ -1.72
CLPBQ9H078 AC244035.1-201ENST00000430042 390 ntBASIC4.31□□□□□ -1.72
CLPBQ9H078 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.31□□□□□ -1.72
CLPBQ9H078 AC098826.1-201ENST00000433943 471 ntBASIC4.31□□□□□ -1.72
CLPBQ9H078 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.31□□□□□ -1.72
CLPBQ9H078 RPL23AP74-201ENST00000437246 471 ntBASIC4.31□□□□□ -1.72
CLPBQ9H078 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.31□□□□□ -1.72
CLPBQ9H078 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.31□□□□□ -1.72
CLPBQ9H078 EEF1E1P1-201ENST00000446998 430 ntBASIC4.31□□□□□ -1.72
CLPBQ9H078 AL451050.1-201ENST00000450126 415 ntBASIC4.31□□□□□ -1.72
CLPBQ9H078 ARPC3P2-201ENST00000457786 533 ntBASIC4.31□□□□□ -1.72
CLPBQ9H078 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.31□□□□□ -1.72
CLPBQ9H078 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.31□□□□□ -1.72
CLPBQ9H078 PABPC1P3-201ENST00000469174 459 ntBASIC4.31□□□□□ -1.72
CLPBQ9H078 AC109486.1-201ENST00000486833 374 ntBASIC4.31□□□□□ -1.72
CLPBQ9H078 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.31□□□□□ -1.72
CLPBQ9H078 AC108475.1-201ENST00000507880 950 ntBASIC4.31□□□□□ -1.72
CLPBQ9H078 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.31□□□□□ -1.72
CLPBQ9H078 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.31□□□□□ -1.72
CLPBQ9H078 MTCYBP43-201ENST00000513621 740 ntBASIC4.31□□□□□ -1.72
CLPBQ9H078 AC026402.1-201ENST00000513642 170 ntBASIC4.31□□□□□ -1.72
CLPBQ9H078 IGLVIV-53-201ENST00000520107 367 ntBASIC4.31□□□□□ -1.72
CLPBQ9H078 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.31□□□□□ -1.72
CLPBQ9H078 AC090819.1-201ENST00000523800 1111 ntBASIC4.31□□□□□ -1.72
CLPBQ9H078 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.31□□□□□ -1.72
CLPBQ9H078 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.31□□□□□ -1.72
CLPBQ9H078 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.31□□□□□ -1.72
CLPBQ9H078 HMGB3P26-201ENST00000560051 582 ntBASIC4.31□□□□□ -1.72
CLPBQ9H078 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.31□□□□□ -1.72
CLPBQ9H078 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.31□□□□□ -1.72
CLPBQ9H078 OR2AS2P-201ENST00000606902 342 ntBASIC4.31□□□□□ -1.72
CLPBQ9H078 AC023043.4-201ENST00000612081 449 ntBASIC4.31□□□□□ -1.72
CLPBQ9H078 AC025588.4-201ENST00000615802 908 ntBASIC4.31□□□□□ -1.72
CLPBQ9H078 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.31□□□□□ -1.72
CLPBQ9H078 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.31□□□□□ -1.72
CLPBQ9H078 CYP3A51P-201ENST00000633513 256 ntBASIC4.31□□□□□ -1.72
CLPBQ9H078 CR381670.1-201ENST00000624291 1693 ntBASIC4.31□□□□□ -1.72
CLPBQ9H078 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLPBQ9H078 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.31□□□□□ -1.72
CLPBQ9H078 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
CLPBQ9H078 AL158163.1-201ENST00000603915 1649 ntBASIC4.31□□□□□ -1.72
CLPBQ9H078 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLPBQ9H078 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLPBQ9H078 AC097504.1-201ENST00000515103 2415 ntBASIC4.31□□□□□ -1.72
CLPBQ9H078 MTCO1P23-201ENST00000415223 1526 ntBASIC4.31□□□□□ -1.72
CLPBQ9H078 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLPBQ9H078 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLPBQ9H078 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLPBQ9H078 AL583835.1-201ENST00000399570 407 ntBASIC4.3□□□□□ -1.72
CLPBQ9H078 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.3□□□□□ -1.72
CLPBQ9H078 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.3□□□□□ -1.72
CLPBQ9H078 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.3□□□□□ -1.72
CLPBQ9H078 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.3□□□□□ -1.72
CLPBQ9H078 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.3□□□□□ -1.72
CLPBQ9H078 AC083875.1-201ENST00000419509 405 ntBASIC4.3□□□□□ -1.72
CLPBQ9H078 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms