Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 SNORA71.2-201ENST00000364941 134 ntBASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 RNU6-348P-201ENST00000384386 107 ntBASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 HDGFP1-201ENST00000405943 252 ntBASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 AC140479.3-201ENST00000418944 1126 ntBASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 MTCO1P42-201ENST00000457379 726 ntBASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 TPT1P7-201ENST00000458300 517 ntBASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 STMN1P2-201ENST00000508435 439 ntBASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 AC093853.1-201ENST00000515689 483 ntBASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 RNA5SP360-201ENST00000516555 118 ntBASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 BRD9P1-201ENST00000529855 560 ntBASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 AC022878.1-201ENST00000530684 149 ntBASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 CENPUP2-201ENST00000555897 1186 ntBASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 AC090615.1-201ENST00000577519 154 ntBASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 MIR4458-201ENST00000578872 75 ntBASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 AC112191.3-201ENST00000604371 277 ntBASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 AC004492.1-201ENST00000607036 742 ntBASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 AC008250.2-201ENST00000615261 205 ntBASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 AC087385.3-201ENST00000620477 187 ntBASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 AL603839.4-201ENST00000624658 1005 ntBASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 AP000843.1-201ENST00000624880 701 ntBASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 PABPC1P7-201ENST00000413177 1513 ntBASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM54Q9BYV2 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 AL049555.1-201ENST00000562834 1933 ntBASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 RNA5SP191-201ENST00000362585 102 ntBASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 RNU6-853P-201ENST00000364306 107 ntBASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 RNU6-1215P-201ENST00000384441 102 ntBASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 MT-TC-201ENST00000387405 66 ntBASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 MTND4LP20-201ENST00000402379 270 ntBASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 RNU2-15P-201ENST00000410692 191 ntBASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 RN7SKP100-201ENST00000411258 284 ntBASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 PDSS1P1-201ENST00000422953 1114 ntBASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 OR8F1P-201ENST00000425243 930 ntBASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 AL445669.1-201ENST00000426743 755 ntBASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 PSMD10P3-201ENST00000437000 448 ntBASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 RPL22P17-201ENST00000438729 315 ntBASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 RPL7P52-201ENST00000449200 742 ntBASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 Z82190.1-201ENST00000454534 490 ntBASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 snoU13.8-201ENST00000458890 104 ntBASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 AC104763.1-201ENST00000475274 360 ntBASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 LARP1BP2-201ENST00000486594 519 ntBASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 AC108022.1-201ENST00000493466 478 ntBASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 OR5H5P-201ENST00000503164 928 ntBASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 AC007599.1-201ENST00000568688 1174 ntBASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 AC015912.2-201ENST00000571053 181 ntBASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 AL355812.1-201ENST00000603215 216 ntBASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 AC015871.2-201ENST00000603605 948 ntBASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 AL359999.1-201ENST00000604513 294 ntBASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 AC109347.2-201ENST00000610220 349 ntBASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 AC131902.3-201ENST00000611767 581 ntBASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 AC008498.1-201ENST00000613012 531 ntBASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 AL049780.3-201ENST00000624612 1583 ntBASIC4.55□□□□□ -1.68
TRIM54Q9BYV2 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms