Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 AL035246.1-201ENST00000433554 1255 ntBASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 Z77249.1-201ENST00000444622 1175 ntBASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 CDC27P1-201ENST00000445384 715 ntBASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 AP004242.1-201ENST00000533701 349 ntBASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 ZNF192P1-203ENST00000565888 810 ntBASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 MIR3912-201ENST00000577566 105 ntBASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 SNORD39.3-201ENST00000584451 71 ntBASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 RPP40P2-201ENST00000603596 712 ntBASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 AL009028.1-201ENST00000604895 802 ntBASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 U7.8-201ENST00000619968 63 ntBASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 AL356863.1-201ENST00000623378 1080 ntBASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 DBF4P1-201ENST00000412976 1892 ntBASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 DCAF13P1-201ENST00000495256 1330 ntBASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 AL122126.1-201ENST00000546905 1318 ntBASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 AP005901.5-201ENST00000545779 1796 ntBASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 AC011978.2-201ENST00000569835 2054 ntBASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.65□□□□□ -1.82
CCM2Q9BSQ5 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.65□□□□□ -1.82
CCM2Q9BSQ5 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.82
CCM2Q9BSQ5 AC006504.1-201ENST00000562493 3666 ntBASIC3.65□□□□□ -1.82
CCM2Q9BSQ5 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 snoZ40.1-201ENST00000364540 72 ntBASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 RNU6-1226P-201ENST00000384317 107 ntBASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 RNU6-921P-201ENST00000384361 107 ntBASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 U8.11-201ENST00000384699 133 ntBASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 U8.12-201ENST00000384701 133 ntBASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 MIR649-201ENST00000384843 97 ntBASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 MIR134-201ENST00000385258 73 ntBASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 SNORD65.1-201ENST00000390889 71 ntBASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 MTND4P22-201ENST00000413116 1169 ntBASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 RPS3AP9-201ENST00000417027 792 ntBASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 GTF2IP23-201ENST00000423746 351 ntBASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 AC005345.1-201ENST00000431868 217 ntBASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 AC122718.1-201ENST00000439448 744 ntBASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 AC092155.2-201ENST00000454675 477 ntBASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 PTGES3P5-201ENST00000455109 434 ntBASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 U8.18-201ENST00000459285 133 ntBASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 FAM133DP-201ENST00000464802 691 ntBASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 RPL21P103-201ENST00000479921 488 ntBASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 AC113347.3-201ENST00000509113 148 ntBASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 AC023141.12-201ENST00000512399 199 ntBASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 HIGD1AP10-201ENST00000527837 282 ntBASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 MED28P5-201ENST00000528254 438 ntBASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 CENPUP2-201ENST00000555897 1186 ntBASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 MTND1P8-201ENST00000571424 950 ntBASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 VN1R83P-201ENST00000595685 445 ntBASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 AC007566.2-201ENST00000603642 413 ntBASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 AC021749.1-201ENST00000604322 607 ntBASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 AC092954.1-201ENST00000609121 445 ntBASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 AL138478.1-201ENST00000612252 832 ntBASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 MIR8058-201ENST00000615737 89 ntBASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 AL121895.2-201ENST00000619558 447 ntBASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 MIR4278-201ENST00000636094 69 ntBASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 LINC02211-204ENST00000642024 1070 ntBASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.65□□□□□ -1.83
CCM2Q9BSQ5 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms