Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 AC073968.1-201ENST00000618594 637 ntBASIC3.79□□□□□ -1.8
CPNE1Q99829 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.79□□□□□ -1.8
CPNE1Q99829 AC092650.2-201ENST00000619984 902 ntBASIC3.79□□□□□ -1.8
CPNE1Q99829 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.79□□□□□ -1.8
CPNE1Q99829 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.79□□□□□ -1.8
CPNE1Q99829 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.79□□□□□ -1.8
CPNE1Q99829 OR6C71P-202ENST00000641886 1107 ntBASIC3.79□□□□□ -1.8
CPNE1Q99829 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CPNE1Q99829 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CPNE1Q99829 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CPNE1Q99829 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.79□□□□□ -1.8
CPNE1Q99829 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.79□□□□□ -1.8
CPNE1Q99829 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CPNE1Q99829 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CPNE1Q99829 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CPNE1Q99829 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CPNE1Q99829 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CPNE1Q99829 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CPNE1Q99829 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.78□□□□□ -1.8
CPNE1Q99829 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CPNE1Q99829 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CPNE1Q99829 RNU4-28P-201ENST00000364739 141 ntBASIC3.78□□□□□ -1.8
CPNE1Q99829 RNU6-621P-201ENST00000364752 109 ntBASIC3.78□□□□□ -1.8
CPNE1Q99829 Y_RNA.311-201ENST00000365068 96 ntBASIC3.78□□□□□ -1.8
CPNE1Q99829 SNORD82-201ENST00000365530 70 ntBASIC3.78□□□□□ -1.8
CPNE1Q99829 ARF4P3-201ENST00000397387 509 ntBASIC3.78□□□□□ -1.8
CPNE1Q99829 SNRPEP2-201ENST00000397592 279 ntBASIC3.78□□□□□ -1.8
CPNE1Q99829 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.78□□□□□ -1.8
CPNE1Q99829 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.78□□□□□ -1.8
CPNE1Q99829 MTND4LP20-201ENST00000402379 270 ntBASIC3.78□□□□□ -1.8
CPNE1Q99829 AL022722.2-201ENST00000402519 180 ntBASIC3.78□□□□□ -1.8
CPNE1Q99829 RPL21P65-201ENST00000406094 466 ntBASIC3.78□□□□□ -1.8
CPNE1Q99829 MIR1183-201ENST00000408856 89 ntBASIC3.78□□□□□ -1.8
CPNE1Q99829 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.78□□□□□ -1.8
CPNE1Q99829 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.78□□□□□ -1.8
CPNE1Q99829 HIGD1AP15-201ENST00000416198 280 ntBASIC3.78□□□□□ -1.8
CPNE1Q99829 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.78□□□□□ -1.8
CPNE1Q99829 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.78□□□□□ -1.8
CPNE1Q99829 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.78□□□□□ -1.8
CPNE1Q99829 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.78□□□□□ -1.8
CPNE1Q99829 RPL39P6-201ENST00000448289 150 ntBASIC3.78□□□□□ -1.8
CPNE1Q99829 RPL12P26-201ENST00000452430 487 ntBASIC3.78□□□□□ -1.8
CPNE1Q99829 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CPNE1Q99829 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.78□□□□□ -1.8
CPNE1Q99829 RPL5P32-201ENST00000454085 879 ntBASIC3.78□□□□□ -1.8
CPNE1Q99829 AC108078.3-201ENST00000502633 489 ntBASIC3.78□□□□□ -1.8
CPNE1Q99829 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.78□□□□□ -1.8
CPNE1Q99829 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.78□□□□□ -1.8
CPNE1Q99829 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.78□□□□□ -1.8
CPNE1Q99829 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.78□□□□□ -1.8
CPNE1Q99829 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.78□□□□□ -1.8
CPNE1Q99829 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.78□□□□□ -1.8
CPNE1Q99829 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.78□□□□□ -1.8
CPNE1Q99829 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.78□□□□□ -1.8
CPNE1Q99829 AC010198.2-201ENST00000550612 259 ntBASIC3.78□□□□□ -1.8
CPNE1Q99829 AC006960.3-201ENST00000561845 705 ntBASIC3.78□□□□□ -1.8
CPNE1Q99829 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.78□□□□□ -1.8
CPNE1Q99829 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.78□□□□□ -1.8
CPNE1Q99829 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.78□□□□□ -1.8
CPNE1Q99829 AC061975.8-201ENST00000587058 721 ntBASIC3.78□□□□□ -1.8
CPNE1Q99829 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.78□□□□□ -1.8
CPNE1Q99829 BNIP3P24-201ENST00000593398 557 ntBASIC3.78□□□□□ -1.8
CPNE1Q99829 AC005255.1-201ENST00000593748 216 ntBASIC3.78□□□□□ -1.8
CPNE1Q99829 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.78□□□□□ -1.8
CPNE1Q99829 AC022022.2-201ENST00000602989 360 ntBASIC3.78□□□□□ -1.8
CPNE1Q99829 DPRXP5-201ENST00000604662 539 ntBASIC3.78□□□□□ -1.8
CPNE1Q99829 IGHV3-29-201ENST00000604817 344 ntBASIC3.78□□□□□ -1.8
CPNE1Q99829 AL592436.1-201ENST00000605135 558 ntBASIC3.78□□□□□ -1.8
CPNE1Q99829 AC131235.4-201ENST00000609288 620 ntBASIC3.78□□□□□ -1.8
CPNE1Q99829 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.78□□□□□ -1.8
CPNE1Q99829 AC079684.1-201ENST00000621405 437 ntBASIC3.78□□□□□ -1.8
CPNE1Q99829 AC112484.5-201ENST00000624189 228 ntBASIC3.78□□□□□ -1.8
CPNE1Q99829 CYP3A51P-201ENST00000633513 256 ntBASIC3.78□□□□□ -1.8
CPNE1Q99829 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CPNE1Q99829 MIR4278-201ENST00000636094 69 ntBASIC3.78□□□□□ -1.8
CPNE1Q99829 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CPNE1Q99829 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CPNE1Q99829 ZNF876P-202ENST00000398732 1485 ntBASIC3.78□□□□□ -1.8
CPNE1Q99829 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CPNE1Q99829 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.78□□□□□ -1.8
CPNE1Q99829 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CPNE1Q99829 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CPNE1Q99829 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
CPNE1Q99829 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CPNE1Q99829 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.77□□□□□ -1.81
CPNE1Q99829 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CPNE1Q99829 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CPNE1Q99829 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CPNE1Q99829 MTCO1P23-201ENST00000415223 1526 ntBASIC3.77□□□□□ -1.81
CPNE1Q99829 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.77□□□□□ -1.81
CPNE1Q99829 Y_RNA.493-201ENST00000384422 102 ntBASIC3.77□□□□□ -1.81
CPNE1Q99829 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CPNE1Q99829 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CPNE1Q99829 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.77□□□□□ -1.81
CPNE1Q99829 RPS26P8-201ENST00000393490 348 ntBASIC3.77□□□□□ -1.81
CPNE1Q99829 AL391417.1-201ENST00000404100 426 ntBASIC3.77□□□□□ -1.81
CPNE1Q99829 RNA5SP56-201ENST00000410277 118 ntBASIC3.77□□□□□ -1.81
CPNE1Q99829 RPS24P7-201ENST00000416921 246 ntBASIC3.77□□□□□ -1.81
CPNE1Q99829 TIMM9P2-201ENST00000419324 266 ntBASIC3.77□□□□□ -1.81
CPNE1Q99829 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms