Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 AGGF1P8-201ENST00000562979 1000 ntBASIC4.17□□□□□ -1.74
CCDC7Q96M83 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC7Q96M83 AC090971.4-201ENST00000560291 1800 ntBASIC4.17□□□□□ -1.74
CCDC7Q96M83 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC7Q96M83 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC7Q96M83 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC7Q96M83 AL451142.2-201ENST00000429076 2090 ntBASIC4.17□□□□□ -1.74
CCDC7Q96M83 OR5J1P-201ENST00000313544 939 ntBASIC4.16□□□□□ -1.74
CCDC7Q96M83 FTLP6-201ENST00000355274 422 ntBASIC4.16□□□□□ -1.74
CCDC7Q96M83 MIR449A-201ENST00000362113 91 ntBASIC4.16□□□□□ -1.74
CCDC7Q96M83 RNU6-146P-201ENST00000384602 108 ntBASIC4.16□□□□□ -1.74
CCDC7Q96M83 MTND4LP20-201ENST00000402379 270 ntBASIC4.16□□□□□ -1.74
CCDC7Q96M83 UBE2V1P15-201ENST00000407776 448 ntBASIC4.16□□□□□ -1.74
CCDC7Q96M83 AC009965.2-201ENST00000425328 970 ntBASIC4.16□□□□□ -1.74
CCDC7Q96M83 FO393419.3-201ENST00000428741 282 ntBASIC4.16□□□□□ -1.74
CCDC7Q96M83 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC7Q96M83 AL031663.1-201ENST00000437445 219 ntBASIC4.16□□□□□ -1.74
CCDC7Q96M83 FTH1P1-201ENST00000437933 532 ntBASIC4.16□□□□□ -1.74
CCDC7Q96M83 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC7Q96M83 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC7Q96M83 MTND2P6-201ENST00000455337 1030 ntBASIC4.16□□□□□ -1.74
CCDC7Q96M83 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC7Q96M83 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC7Q96M83 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC7Q96M83 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC7Q96M83 GTF3AP2-201ENST00000557014 266 ntBASIC4.16□□□□□ -1.74
CCDC7Q96M83 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC7Q96M83 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC7Q96M83 AL450270.1-201ENST00000606160 391 ntBASIC4.16□□□□□ -1.74
CCDC7Q96M83 AC004775.1-201ENST00000607389 753 ntBASIC4.16□□□□□ -1.74
CCDC7Q96M83 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC7Q96M83 AC116563.2-201ENST00000624751 535 ntBASIC4.16□□□□□ -1.74
CCDC7Q96M83 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CCDC7Q96M83 AL365361.1-201ENST00000566942 3481 ntBASIC4.16□□□□□ -1.74
CCDC7Q96M83 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC7Q96M83 PHKBP1-201ENST00000450951 1951 ntBASIC4.16□□□□□ -1.74
CCDC7Q96M83 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CCDC7Q96M83 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC7Q96M83 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC7Q96M83 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.15□□□□□ -1.74
CCDC7Q96M83 RNU6-317P-201ENST00000384031 107 ntBASIC4.15□□□□□ -1.74
CCDC7Q96M83 RPL31P1-201ENST00000398116 372 ntBASIC4.15□□□□□ -1.74
CCDC7Q96M83 TAF9BP2-201ENST00000400856 499 ntBASIC4.15□□□□□ -1.74
CCDC7Q96M83 EEF1A1P41-201ENST00000414667 207 ntBASIC4.15□□□□□ -1.74
CCDC7Q96M83 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.15□□□□□ -1.74
CCDC7Q96M83 MTND4P11-201ENST00000417020 1058 ntBASIC4.15□□□□□ -1.74
CCDC7Q96M83 AL159169.1-201ENST00000421119 127 ntBASIC4.15□□□□□ -1.74
CCDC7Q96M83 CBX1P4-201ENST00000439415 457 ntBASIC4.15□□□□□ -1.74
CCDC7Q96M83 AC000041.1-201ENST00000439655 175 ntBASIC4.15□□□□□ -1.74
CCDC7Q96M83 AL357520.1-201ENST00000441557 453 ntBASIC4.15□□□□□ -1.74
CCDC7Q96M83 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.15□□□□□ -1.74
CCDC7Q96M83 PRELID3BP7-201ENST00000503606 469 ntBASIC4.15□□□□□ -1.74
CCDC7Q96M83 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
CCDC7Q96M83 RN7SKP43-201ENST00000516173 320 ntBASIC4.15□□□□□ -1.74
CCDC7Q96M83 RPL12P22-201ENST00000519073 490 ntBASIC4.15□□□□□ -1.74
CCDC7Q96M83 AC087272.1-201ENST00000523624 533 ntBASIC4.15□□□□□ -1.74
CCDC7Q96M83 SMARCE1P4-201ENST00000523647 241 ntBASIC4.15□□□□□ -1.74
CCDC7Q96M83 PDCL2P2-201ENST00000533651 189 ntBASIC4.15□□□□□ -1.74
CCDC7Q96M83 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.15□□□□□ -1.74
CCDC7Q96M83 AC233266.2-201ENST00000567067 528 ntBASIC4.15□□□□□ -1.74
CCDC7Q96M83 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.15□□□□□ -1.74
CCDC7Q96M83 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.15□□□□□ -1.74
CCDC7Q96M83 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.15□□□□□ -1.74
CCDC7Q96M83 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.15□□□□□ -1.74
CCDC7Q96M83 AL390838.2-201ENST00000602394 274 ntBASIC4.15□□□□□ -1.74
CCDC7Q96M83 AC135178.6-201ENST00000605314 398 ntBASIC4.15□□□□□ -1.74
CCDC7Q96M83 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.15□□□□□ -1.74
CCDC7Q96M83 MIR7973-1-201ENST00000614683 76 ntBASIC4.15□□□□□ -1.74
CCDC7Q96M83 AP003485.2-201ENST00000623636 610 ntBASIC4.15□□□□□ -1.74
CCDC7Q96M83 AC090617.9-201ENST00000623751 147 ntBASIC4.15□□□□□ -1.74
CCDC7Q96M83 AC091948.2-201ENST00000636510 279 ntBASIC4.15□□□□□ -1.74
CCDC7Q96M83 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
CCDC7Q96M83 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC7Q96M83 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC7Q96M83 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CCDC7Q96M83 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC7Q96M83 MIR142-201ENST00000384835 87 ntBASIC4.14□□□□□ -1.75
CCDC7Q96M83 MTCO3P4-201ENST00000419236 787 ntBASIC4.14□□□□□ -1.75
CCDC7Q96M83 ARL2BPP3-201ENST00000421226 480 ntBASIC4.14□□□□□ -1.75
CCDC7Q96M83 DUTP6-201ENST00000425573 462 ntBASIC4.14□□□□□ -1.75
CCDC7Q96M83 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC7Q96M83 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC7Q96M83 RN7SL633P-201ENST00000488974 297 ntBASIC4.14□□□□□ -1.75
CCDC7Q96M83 SNORA31.13-201ENST00000516624 135 ntBASIC4.14□□□□□ -1.75
CCDC7Q96M83 AC103833.1-201ENST00000517442 172 ntBASIC4.14□□□□□ -1.75
CCDC7Q96M83 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC7Q96M83 HMGB3P26-201ENST00000560051 582 ntBASIC4.14□□□□□ -1.75
CCDC7Q96M83 LINC00557-201ENST00000563184 1279 ntBASIC4.14□□□□□ -1.75
CCDC7Q96M83 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC7Q96M83 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC7Q96M83 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC7Q96M83 ZNF92P3-201ENST00000596594 954 ntBASIC4.14□□□□□ -1.75
CCDC7Q96M83 AL450489.1-201ENST00000612071 468 ntBASIC4.14□□□□□ -1.75
CCDC7Q96M83 AC004825.2-201ENST00000616634 455 ntBASIC4.14□□□□□ -1.75
CCDC7Q96M83 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC7Q96M83 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC7Q96M83 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC7Q96M83 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC7Q96M83 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.14□□□□□ -1.75
CCDC7Q96M83 GTF2H2B-203ENST00000508065 1432 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms