Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.88□□□□□ -1.79
VMP1Q96GC9 AC110792.1-201ENST00000491826 472 ntBASIC3.88□□□□□ -1.79
VMP1Q96GC9 RN7SL604P-201ENST00000492589 296 ntBASIC3.88□□□□□ -1.79
VMP1Q96GC9 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.88□□□□□ -1.79
VMP1Q96GC9 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.88□□□□□ -1.79
VMP1Q96GC9 BTF3L4P4-201ENST00000506381 449 ntBASIC3.88□□□□□ -1.79
VMP1Q96GC9 SUMO2P5-201ENST00000506790 245 ntBASIC3.88□□□□□ -1.79
VMP1Q96GC9 AC069306.1-201ENST00000507006 843 ntBASIC3.88□□□□□ -1.79
VMP1Q96GC9 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.88□□□□□ -1.79
VMP1Q96GC9 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.88□□□□□ -1.79
VMP1Q96GC9 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.88□□□□□ -1.79
VMP1Q96GC9 TRAV15-201ENST00000556680 249 ntBASIC3.88□□□□□ -1.79
VMP1Q96GC9 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.88□□□□□ -1.79
VMP1Q96GC9 AC138915.2-201ENST00000569776 97 ntBASIC3.88□□□□□ -1.79
VMP1Q96GC9 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.88□□□□□ -1.79
VMP1Q96GC9 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.88□□□□□ -1.79
VMP1Q96GC9 BNIP3P24-201ENST00000593398 557 ntBASIC3.88□□□□□ -1.79
VMP1Q96GC9 BDH2P1-201ENST00000602288 736 ntBASIC3.88□□□□□ -1.79
VMP1Q96GC9 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.88□□□□□ -1.79
VMP1Q96GC9 AC093673.2-201ENST00000609674 331 ntBASIC3.88□□□□□ -1.79
VMP1Q96GC9 AC064801.1-201ENST00000612025 407 ntBASIC3.88□□□□□ -1.79
VMP1Q96GC9 MIR7702-201ENST00000621931 59 ntBASIC3.88□□□□□ -1.79
VMP1Q96GC9 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.88□□□□□ -1.79
VMP1Q96GC9 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.88□□□□□ -1.79
VMP1Q96GC9 MKKS-204ENST00000639674 192 ntBASIC3.88□□□□□ -1.79
VMP1Q96GC9 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
VMP1Q96GC9 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VMP1Q96GC9 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.88□□□□□ -1.79
VMP1Q96GC9 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VMP1Q96GC9 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
VMP1Q96GC9 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
VMP1Q96GC9 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
VMP1Q96GC9 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VMP1Q96GC9 RNU6-1257P-201ENST00000384625 110 ntBASIC3.87□□□□□ -1.79
VMP1Q96GC9 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.87□□□□□ -1.79
VMP1Q96GC9 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.87□□□□□ -1.79
VMP1Q96GC9 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.87□□□□□ -1.79
VMP1Q96GC9 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.87□□□□□ -1.79
VMP1Q96GC9 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.87□□□□□ -1.79
VMP1Q96GC9 AC011242.1-201ENST00000433596 1158 ntBASIC3.87□□□□□ -1.79
VMP1Q96GC9 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
VMP1Q96GC9 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.87□□□□□ -1.79
VMP1Q96GC9 NUTF2P7-201ENST00000453086 375 ntBASIC3.87□□□□□ -1.79
VMP1Q96GC9 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.87□□□□□ -1.79
VMP1Q96GC9 RPL6P9-201ENST00000466502 859 ntBASIC3.87□□□□□ -1.79
VMP1Q96GC9 OR4G11P-201ENST00000492842 939 ntBASIC3.87□□□□□ -1.79
VMP1Q96GC9 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.87□□□□□ -1.79
VMP1Q96GC9 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.87□□□□□ -1.79
VMP1Q96GC9 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.87□□□□□ -1.79
VMP1Q96GC9 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.87□□□□□ -1.79
VMP1Q96GC9 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.87□□□□□ -1.79
VMP1Q96GC9 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.87□□□□□ -1.79
VMP1Q96GC9 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.87□□□□□ -1.79
VMP1Q96GC9 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
VMP1Q96GC9 AC063950.1-201ENST00000552036 308 ntBASIC3.87□□□□□ -1.79
VMP1Q96GC9 AL391156.1-201ENST00000554965 554 ntBASIC3.87□□□□□ -1.79
VMP1Q96GC9 GTF2IP8-201ENST00000560687 584 ntBASIC3.87□□□□□ -1.79
VMP1Q96GC9 AC007224.1-201ENST00000564410 144 ntBASIC3.87□□□□□ -1.79
VMP1Q96GC9 RN7SL600P-201ENST00000581811 299 ntBASIC3.87□□□□□ -1.79
VMP1Q96GC9 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.87□□□□□ -1.79
VMP1Q96GC9 AC006116.7-201ENST00000590141 756 ntBASIC3.87□□□□□ -1.79
VMP1Q96GC9 AC022146.1-201ENST00000595307 847 ntBASIC3.87□□□□□ -1.79
VMP1Q96GC9 AC010975.3-201ENST00000618727 978 ntBASIC3.87□□□□□ -1.79
VMP1Q96GC9 AL138955.1-201ENST00000622881 1040 ntBASIC3.87□□□□□ -1.79
VMP1Q96GC9 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.87□□□□□ -1.79
VMP1Q96GC9 U6.101-201ENST00000637707 76 ntBASIC3.87□□□□□ -1.79
VMP1Q96GC9 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
VMP1Q96GC9 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VMP1Q96GC9 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
VMP1Q96GC9 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.86□□□□□ -1.79
VMP1Q96GC9 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VMP1Q96GC9 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.86□□□□□ -1.79
VMP1Q96GC9 SNORA37-201ENST00000384504 129 ntBASIC3.86□□□□□ -1.79
VMP1Q96GC9 RNA5SP317-201ENST00000410176 116 ntBASIC3.86□□□□□ -1.79
VMP1Q96GC9 RNA5SP311-201ENST00000411290 116 ntBASIC3.86□□□□□ -1.79
VMP1Q96GC9 AC109780.2-201ENST00000413467 845 ntBASIC3.86□□□□□ -1.79
VMP1Q96GC9 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.86□□□□□ -1.79
VMP1Q96GC9 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.86□□□□□ -1.79
VMP1Q96GC9 RPL23AP74-201ENST00000437246 471 ntBASIC3.86□□□□□ -1.79
VMP1Q96GC9 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.86□□□□□ -1.79
VMP1Q96GC9 HIGD1AP11-201ENST00000438361 280 ntBASIC3.86□□□□□ -1.79
VMP1Q96GC9 MTCYBP34-201ENST00000439552 670 ntBASIC3.86□□□□□ -1.79
VMP1Q96GC9 MTCYBP11-201ENST00000447254 1109 ntBASIC3.86□□□□□ -1.79
VMP1Q96GC9 RFC5P1-201ENST00000454419 874 ntBASIC3.86□□□□□ -1.79
VMP1Q96GC9 RPL36AP13-201ENST00000457490 317 ntBASIC3.86□□□□□ -1.79
VMP1Q96GC9 RPL38P1-201ENST00000460914 211 ntBASIC3.86□□□□□ -1.79
VMP1Q96GC9 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.86□□□□□ -1.79
VMP1Q96GC9 ST13P14-201ENST00000474095 734 ntBASIC3.86□□□□□ -1.79
VMP1Q96GC9 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.86□□□□□ -1.79
VMP1Q96GC9 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.86□□□□□ -1.79
VMP1Q96GC9 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.86□□□□□ -1.79
VMP1Q96GC9 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VMP1Q96GC9 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.86□□□□□ -1.79
VMP1Q96GC9 AC108043.1-201ENST00000512696 574 ntBASIC3.86□□□□□ -1.79
VMP1Q96GC9 AC010342.1-201ENST00000514047 877 ntBASIC3.86□□□□□ -1.79
VMP1Q96GC9 RNA5SP315-201ENST00000516340 116 ntBASIC3.86□□□□□ -1.79
VMP1Q96GC9 RNA5SP312-201ENST00000517068 116 ntBASIC3.86□□□□□ -1.79
VMP1Q96GC9 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.86□□□□□ -1.79
VMP1Q96GC9 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.86□□□□□ -1.79
VMP1Q96GC9 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms