Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.46□□□□□ -1.38
HLA-CQ95604 VN1R91P-201ENST00000594377 169 ntBASIC6.46□□□□□ -1.38
HLA-CQ95604 AL713866.2-201ENST00000603579 219 ntBASIC6.46□□□□□ -1.38
HLA-CQ95604 IMMP1LP3-201ENST00000604197 224 ntBASIC6.46□□□□□ -1.38
HLA-CQ95604 RAC1P9-201ENST00000604990 392 ntBASIC6.46□□□□□ -1.38
HLA-CQ95604 RPL12P48-201ENST00000605620 304 ntBASIC6.46□□□□□ -1.38
HLA-CQ95604 AC120057.5-201ENST00000623840 154 ntBASIC6.46□□□□□ -1.38
HLA-CQ95604 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HLA-CQ95604 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HLA-CQ95604 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC6.46□□□□□ -1.38
HLA-CQ95604 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
HLA-CQ95604 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.38
HLA-CQ95604 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-CQ95604 PANDAR-201ENST00000629595 1506 ntBASIC6.45□□□□□ -1.38
HLA-CQ95604 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.45□□□□□ -1.38
HLA-CQ95604 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
HLA-CQ95604 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-CQ95604 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-CQ95604 CTAGE11P-201ENST00000451540 2353 ntBASIC6.45□□□□□ -1.38
HLA-CQ95604 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.45□□□□□ -1.38
HLA-CQ95604 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-CQ95604 AC024651.2-201ENST00000562480 2098 ntBASIC6.45□□□□□ -1.38
HLA-CQ95604 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
HLA-CQ95604 SNORA64.1-201ENST00000362600 132 ntBASIC6.45□□□□□ -1.38
HLA-CQ95604 RNA5SP391-201ENST00000363456 119 ntBASIC6.45□□□□□ -1.38
HLA-CQ95604 RNU6-1059P-201ENST00000363752 98 ntBASIC6.45□□□□□ -1.38
HLA-CQ95604 RN7SKP124-201ENST00000364730 341 ntBASIC6.45□□□□□ -1.38
HLA-CQ95604 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-CQ95604 Y_RNA.480-201ENST00000384364 102 ntBASIC6.45□□□□□ -1.38
HLA-CQ95604 U3.29-201ENST00000391296 212 ntBASIC6.45□□□□□ -1.38
HLA-CQ95604 PRELID1P2-201ENST00000407805 396 ntBASIC6.45□□□□□ -1.38
HLA-CQ95604 RNU6-1156P-201ENST00000410365 100 ntBASIC6.45□□□□□ -1.38
HLA-CQ95604 MTCO3P19-201ENST00000415864 321 ntBASIC6.45□□□□□ -1.38
HLA-CQ95604 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.45□□□□□ -1.38
HLA-CQ95604 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC6.45□□□□□ -1.38
HLA-CQ95604 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC6.45□□□□□ -1.38
HLA-CQ95604 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.45□□□□□ -1.38
HLA-CQ95604 AC093106.2-201ENST00000428212 385 ntBASIC6.45□□□□□ -1.38
HLA-CQ95604 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.45□□□□□ -1.38
HLA-CQ95604 AL772161.1-201ENST00000439130 476 ntBASIC6.45□□□□□ -1.38
HLA-CQ95604 FTH1P25-201ENST00000447665 469 ntBASIC6.45□□□□□ -1.38
HLA-CQ95604 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC6.45□□□□□ -1.38
HLA-CQ95604 GEMIN2P1-201ENST00000454246 752 ntBASIC6.45□□□□□ -1.38
HLA-CQ95604 RNU7-138P-201ENST00000459479 64 ntBASIC6.45□□□□□ -1.38
HLA-CQ95604 HMGB1P35-201ENST00000503360 598 ntBASIC6.45□□□□□ -1.38
HLA-CQ95604 RNU5B-3P-201ENST00000516601 115 ntBASIC6.45□□□□□ -1.38
HLA-CQ95604 AC012339.2-201ENST00000523996 453 ntBASIC6.45□□□□□ -1.38
HLA-CQ95604 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC6.45□□□□□ -1.38
HLA-CQ95604 AC025423.5-201ENST00000550230 219 ntBASIC6.45□□□□□ -1.38
HLA-CQ95604 AC123768.4-201ENST00000616244 701 ntBASIC6.45□□□□□ -1.38
HLA-CQ95604 AC130454.1-201ENST00000622948 401 ntBASIC6.45□□□□□ -1.38
HLA-CQ95604 RMST-210ENST00000640149 2844 ntTSL 5 BASIC6.45□□□□□ -1.38
HLA-CQ95604 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
HLA-CQ95604 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-CQ95604 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
HLA-CQ95604 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC6.45□□□□□ -1.38
HLA-CQ95604 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
HLA-CQ95604 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-CQ95604 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
HLA-CQ95604 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-CQ95604 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-CQ95604 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
HLA-CQ95604 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.45□□□□□ -1.38
HLA-CQ95604 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-CQ95604 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-CQ95604 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-CQ95604 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-CQ95604 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
HLA-CQ95604 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.44□□□□□ -1.38
HLA-CQ95604 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.44□□□□□ -1.38
HLA-CQ95604 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.44□□□□□ -1.38
HLA-CQ95604 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-CQ95604 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-CQ95604 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-CQ95604 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
HLA-CQ95604 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-CQ95604 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-CQ95604 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-CQ95604 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
HLA-CQ95604 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-CQ95604 Y_RNA.19-201ENST00000362462 99 ntBASIC6.44□□□□□ -1.38
HLA-CQ95604 MIR517A-201ENST00000385001 87 ntBASIC6.44□□□□□ -1.38
HLA-CQ95604 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
HLA-CQ95604 RNU4-65P-201ENST00000410473 140 ntBASIC6.44□□□□□ -1.38
HLA-CQ95604 RNA5SP111-201ENST00000411386 101 ntBASIC6.44□□□□□ -1.38
HLA-CQ95604 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC6.44□□□□□ -1.38
HLA-CQ95604 AC010733.1-201ENST00000451515 401 ntBASIC6.44□□□□□ -1.38
HLA-CQ95604 RPL23AP31-201ENST00000456160 467 ntBASIC6.44□□□□□ -1.38
HLA-CQ95604 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.44□□□□□ -1.38
HLA-CQ95604 TRBVB-201ENST00000477100 408 ntBASIC6.44□□□□□ -1.38
HLA-CQ95604 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC6.44□□□□□ -1.38
HLA-CQ95604 AC139365.2-201ENST00000517972 253 ntBASIC6.44□□□□□ -1.38
HLA-CQ95604 IGKV1D-22-201ENST00000518953 324 ntBASIC6.44□□□□□ -1.38
HLA-CQ95604 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.44□□□□□ -1.38
HLA-CQ95604 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC6.44□□□□□ -1.38
HLA-CQ95604 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.44□□□□□ -1.38
HLA-CQ95604 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.44□□□□□ -1.38
HLA-CQ95604 AC093227.2-201ENST00000589357 285 ntBASIC6.44□□□□□ -1.38
HLA-CQ95604 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-CQ95604 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms