Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SNED1Q8TER0 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SNED1Q8TER0 MTND4P4-201ENST00000439033 1366 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SNED1Q8TER0 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.12□□□□□ -1.75
SNED1Q8TER0 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.12□□□□□ -1.75
SNED1Q8TER0 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SNED1Q8TER0 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.12□□□□□ -1.75
SNED1Q8TER0 SNORA54-201ENST00000384281 123 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 SNORD116-1-201ENST00000384335 95 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 RNU6-906P-201ENST00000384700 70 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SNED1Q8TER0 RNU4-27P-201ENST00000410889 139 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.12□□□□□ -1.75
SNED1Q8TER0 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.12□□□□□ -1.75
SNED1Q8TER0 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SNED1Q8TER0 AL606495.1-201ENST00000422100 813 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.12□□□□□ -1.75
SNED1Q8TER0 RPL23AP69-201ENST00000431134 458 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 MTND1P34-201ENST00000438556 671 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 AC025750.2-201ENST00000442609 450 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.12□□□□□ -1.75
SNED1Q8TER0 AC092155.2-201ENST00000454675 477 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 PRDX3P4-201ENST00000470828 747 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 RN7SL429P-201ENST00000479090 223 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 RN7SL489P-201ENST00000486185 223 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 RN7SL327P-201ENST00000488659 223 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SNED1Q8TER0 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.12□□□□□ -1.75
SNED1Q8TER0 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.12□□□□□ -1.75
SNED1Q8TER0 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.12□□□□□ -1.75
SNED1Q8TER0 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.12□□□□□ -1.75
SNED1Q8TER0 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.12□□□□□ -1.75
SNED1Q8TER0 Y_RNA.655-201ENST00000515919 96 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.12□□□□□ -1.75
SNED1Q8TER0 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.12□□□□□ -1.75
SNED1Q8TER0 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.12□□□□□ -1.75
SNED1Q8TER0 OR10V3P-201ENST00000525712 725 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.12□□□□□ -1.75
SNED1Q8TER0 AC004024.1-201ENST00000549244 247 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.12□□□□□ -1.75
SNED1Q8TER0 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.12□□□□□ -1.75
SNED1Q8TER0 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.12□□□□□ -1.75
SNED1Q8TER0 VN1R78P-201ENST00000597393 564 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.12□□□□□ -1.75
SNED1Q8TER0 Z99497.2-201ENST00000603634 310 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 AL162274.2-201ENST00000614406 332 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 AC009318.3-201ENST00000616916 503 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 RN7SL853P-201ENST00000617250 223 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SNED1Q8TER0 MIR3974-201ENST00000637126 96 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 BX649567.1-201ENST00000642071 1134 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 AC017007.4-201ENST00000503353 1352 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 NMD3P1-201ENST00000439704 1488 ntBASIC4.11□□□□□ -1.75
SNED1Q8TER0 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SNED1Q8TER0 AL049555.1-201ENST00000562834 1933 ntBASIC4.11□□□□□ -1.75
SNED1Q8TER0 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.11□□□□□ -1.75
SNED1Q8TER0 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.11□□□□□ -1.75
SNED1Q8TER0 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
SNED1Q8TER0 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SNED1Q8TER0 RNU1-140P-201ENST00000365040 165 ntBASIC4.11□□□□□ -1.75
SNED1Q8TER0 AC119751.3-201ENST00000399720 670 ntBASIC4.11□□□□□ -1.75
SNED1Q8TER0 HMGB1P13-201ENST00000406019 642 ntBASIC4.11□□□□□ -1.75
SNED1Q8TER0 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.11□□□□□ -1.75
SNED1Q8TER0 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SNED1Q8TER0 RPL26P37-201ENST00000411983 438 ntBASIC4.11□□□□□ -1.75
SNED1Q8TER0 MTND4P22-201ENST00000413116 1169 ntBASIC4.11□□□□□ -1.75
SNED1Q8TER0 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SNED1Q8TER0 BX664727.1-201ENST00000416024 466 ntBASIC4.11□□□□□ -1.75
SNED1Q8TER0 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.11□□□□□ -1.75
SNED1Q8TER0 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.11□□□□□ -1.75
SNED1Q8TER0 MTND2P18-201ENST00000419962 1030 ntBASIC4.11□□□□□ -1.75
SNED1Q8TER0 ARL2BPP3-201ENST00000421226 480 ntBASIC4.11□□□□□ -1.75
SNED1Q8TER0 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.11□□□□□ -1.75
SNED1Q8TER0 AC008065.1-201ENST00000428525 348 ntBASIC4.11□□□□□ -1.75
SNED1Q8TER0 AL353898.1-201ENST00000444055 238 ntBASIC4.11□□□□□ -1.75
SNED1Q8TER0 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.11□□□□□ -1.75
SNED1Q8TER0 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.11□□□□□ -1.75
SNED1Q8TER0 AL157827.1-201ENST00000447622 132 ntBASIC4.11□□□□□ -1.75
SNED1Q8TER0 IFNWP4-201ENST00000453148 294 ntBASIC4.11□□□□□ -1.75
SNED1Q8TER0 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.11□□□□□ -1.75
SNED1Q8TER0 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.11□□□□□ -1.75
SNED1Q8TER0 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.11□□□□□ -1.75
SNED1Q8TER0 RN7SL93P-201ENST00000463035 293 ntBASIC4.11□□□□□ -1.75
SNED1Q8TER0 AC008379.1-201ENST00000463655 464 ntBASIC4.11□□□□□ -1.75
SNED1Q8TER0 RPS17P11-201ENST00000474297 293 ntBASIC4.11□□□□□ -1.75
SNED1Q8TER0 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SNED1Q8TER0 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.11□□□□□ -1.75
SNED1Q8TER0 RNU6-347P-201ENST00000516658 105 ntBASIC4.11□□□□□ -1.75
SNED1Q8TER0 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.11□□□□□ -1.75
SNED1Q8TER0 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
SNED1Q8TER0 AC090819.1-201ENST00000523800 1111 ntBASIC4.11□□□□□ -1.75
SNED1Q8TER0 OR4R3P-201ENST00000525084 838 ntBASIC4.11□□□□□ -1.75
SNED1Q8TER0 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SNED1Q8TER0 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.11□□□□□ -1.75
SNED1Q8TER0 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SNED1Q8TER0 AC006504.3-201ENST00000586818 523 ntBASIC4.11□□□□□ -1.75
SNED1Q8TER0 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.11□□□□□ -1.75
SNED1Q8TER0 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.11□□□□□ -1.75
SNED1Q8TER0 AC090425.2-201ENST00000608818 501 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms