Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.83□□□□□ -1.8
COL22A1Q8NFW1 LINC01355-201ENST00000566551 5444 ntBASIC3.83□□□□□ -1.8
COL22A1Q8NFW1 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL22A1Q8NFW1 RNU1-75P-201ENST00000347264 129 ntBASIC3.83□□□□□ -1.8
COL22A1Q8NFW1 U8.2-201ENST00000363156 134 ntBASIC3.83□□□□□ -1.8
COL22A1Q8NFW1 RNU6-670P-201ENST00000364312 104 ntBASIC3.83□□□□□ -1.8
COL22A1Q8NFW1 MIR7-1-201ENST00000384871 110 ntBASIC3.83□□□□□ -1.8
COL22A1Q8NFW1 MIR320B1-201ENST00000390209 79 ntBASIC3.83□□□□□ -1.8
COL22A1Q8NFW1 RPL23AP48-201ENST00000406913 488 ntBASIC3.83□□□□□ -1.8
COL22A1Q8NFW1 RN7SKP223-201ENST00000410582 62 ntBASIC3.83□□□□□ -1.8
COL22A1Q8NFW1 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.83□□□□□ -1.8
COL22A1Q8NFW1 AC009965.2-201ENST00000425328 970 ntBASIC3.83□□□□□ -1.8
COL22A1Q8NFW1 RPL29P29-201ENST00000448725 423 ntBASIC3.83□□□□□ -1.8
COL22A1Q8NFW1 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.83□□□□□ -1.8
COL22A1Q8NFW1 AP003122.3-201ENST00000526316 255 ntBASIC3.83□□□□□ -1.8
COL22A1Q8NFW1 HMGB3P26-201ENST00000560051 582 ntBASIC3.83□□□□□ -1.8
COL22A1Q8NFW1 SNORD53-201ENST00000579969 78 ntBASIC3.83□□□□□ -1.8
COL22A1Q8NFW1 AC010200.2-201ENST00000605098 235 ntBASIC3.83□□□□□ -1.8
COL22A1Q8NFW1 AC110741.2-201ENST00000605278 268 ntBASIC3.83□□□□□ -1.8
COL22A1Q8NFW1 uc_338.9-201ENST00000617424 182 ntBASIC3.83□□□□□ -1.8
COL22A1Q8NFW1 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.83□□□□□ -1.8
COL22A1Q8NFW1 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL22A1Q8NFW1 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.82□□□□□ -1.8
COL22A1Q8NFW1 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.82□□□□□ -1.8
COL22A1Q8NFW1 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
COL22A1Q8NFW1 AL513477.1-202ENST00000417061 214 ntBASIC3.82□□□□□ -1.8
COL22A1Q8NFW1 AC073136.2-201ENST00000417282 849 ntBASIC3.82□□□□□ -1.8
COL22A1Q8NFW1 NDUFA5P10-201ENST00000432147 357 ntBASIC3.82□□□□□ -1.8
COL22A1Q8NFW1 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.82□□□□□ -1.8
COL22A1Q8NFW1 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.82□□□□□ -1.8
COL22A1Q8NFW1 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.82□□□□□ -1.8
COL22A1Q8NFW1 RNU6-1231P-201ENST00000517185 103 ntBASIC3.82□□□□□ -1.8
COL22A1Q8NFW1 AP001646.1-201ENST00000527936 915 ntBASIC3.82□□□□□ -1.8
COL22A1Q8NFW1 AC068446.3-201ENST00000555285 382 ntBASIC3.82□□□□□ -1.8
COL22A1Q8NFW1 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.82□□□□□ -1.8
COL22A1Q8NFW1 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
COL22A1Q8NFW1 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
COL22A1Q8NFW1 PHKBP1-201ENST00000450951 1951 ntBASIC3.82□□□□□ -1.8
COL22A1Q8NFW1 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
COL22A1Q8NFW1 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
COL22A1Q8NFW1 RNA5SP289-201ENST00000362332 137 ntBASIC3.81□□□□□ -1.8
COL22A1Q8NFW1 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
COL22A1Q8NFW1 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.81□□□□□ -1.8
COL22A1Q8NFW1 MRPS33P4-201ENST00000434892 317 ntBASIC3.81□□□□□ -1.8
COL22A1Q8NFW1 RPL23AP23-201ENST00000452590 471 ntBASIC3.81□□□□□ -1.8
COL22A1Q8NFW1 AP001025.2-201ENST00000490908 477 ntBASIC3.81□□□□□ -1.8
COL22A1Q8NFW1 RPS29P21-201ENST00000496272 170 ntBASIC3.81□□□□□ -1.8
COL22A1Q8NFW1 AC018797.3-201ENST00000513388 1241 ntBASIC3.81□□□□□ -1.8
COL22A1Q8NFW1 ATP5F1P5-201ENST00000526403 760 ntBASIC3.81□□□□□ -1.8
COL22A1Q8NFW1 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.81□□□□□ -1.8
COL22A1Q8NFW1 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.81□□□□□ -1.8
COL22A1Q8NFW1 AP001542.1-201ENST00000591314 200 ntBASIC3.81□□□□□ -1.8
COL22A1Q8NFW1 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.81□□□□□ -1.8
COL22A1Q8NFW1 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL22A1Q8NFW1 RPL23AP61-201ENST00000623642 466 ntBASIC3.81□□□□□ -1.8
COL22A1Q8NFW1 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL22A1Q8NFW1 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.81□□□□□ -1.8
COL22A1Q8NFW1 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL22A1Q8NFW1 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
COL22A1Q8NFW1 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL22A1Q8NFW1 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL22A1Q8NFW1 MIR421-201ENST00000365696 85 ntBASIC3.81□□□□□ -1.8
COL22A1Q8NFW1 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL22A1Q8NFW1 MIR592-201ENST00000384959 97 ntBASIC3.81□□□□□ -1.8
COL22A1Q8NFW1 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.81□□□□□ -1.8
COL22A1Q8NFW1 HMGB3P8-201ENST00000449709 577 ntBASIC3.81□□□□□ -1.8
COL22A1Q8NFW1 AC108120.2-201ENST00000512973 294 ntBASIC3.81□□□□□ -1.8
COL22A1Q8NFW1 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.81□□□□□ -1.8
COL22A1Q8NFW1 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.81□□□□□ -1.8
COL22A1Q8NFW1 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.81□□□□□ -1.8
COL22A1Q8NFW1 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.81□□□□□ -1.8
COL22A1Q8NFW1 AC090525.3-201ENST00000605601 189 ntBASIC3.81□□□□□ -1.8
COL22A1Q8NFW1 AC017076.1-201ENST00000607613 578 ntBASIC3.81□□□□□ -1.8
COL22A1Q8NFW1 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL22A1Q8NFW1 AC008725.1-201ENST00000605123 2263 ntBASIC3.8□□□□□ -1.8
COL22A1Q8NFW1 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.8□□□□□ -1.8
COL22A1Q8NFW1 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
COL22A1Q8NFW1 RNU6-244P-201ENST00000391028 104 ntBASIC3.8□□□□□ -1.8
COL22A1Q8NFW1 AL583834.1-201ENST00000406943 343 ntBASIC3.8□□□□□ -1.8
COL22A1Q8NFW1 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
COL22A1Q8NFW1 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.8□□□□□ -1.8
COL22A1Q8NFW1 IFNA11P-201ENST00000446352 526 ntBASIC3.8□□□□□ -1.8
COL22A1Q8NFW1 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.8□□□□□ -1.8
COL22A1Q8NFW1 AL162389.1-201ENST00000449233 177 ntBASIC3.8□□□□□ -1.8
COL22A1Q8NFW1 AP002345.1-201ENST00000456493 928 ntBASIC3.8□□□□□ -1.8
COL22A1Q8NFW1 AC008837.1-201ENST00000511513 412 ntBASIC3.8□□□□□ -1.8
COL22A1Q8NFW1 RNA5SP148-201ENST00000516527 94 ntBASIC3.8□□□□□ -1.8
COL22A1Q8NFW1 RNU6-1308P-201ENST00000516817 103 ntBASIC3.8□□□□□ -1.8
COL22A1Q8NFW1 RN7SKP283-201ENST00000517197 270 ntBASIC3.8□□□□□ -1.8
COL22A1Q8NFW1 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.8□□□□□ -1.8
COL22A1Q8NFW1 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
COL22A1Q8NFW1 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.8□□□□□ -1.8
COL22A1Q8NFW1 AC007423.1-201ENST00000605009 627 ntBASIC3.8□□□□□ -1.8
COL22A1Q8NFW1 AC131238.1-201ENST00000617135 328 ntBASIC3.8□□□□□ -1.8
COL22A1Q8NFW1 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
COL22A1Q8NFW1 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
COL22A1Q8NFW1 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
COL22A1Q8NFW1 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.79□□□□□ -1.8
COL22A1Q8NFW1 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COL22A1Q8NFW1 MIR708-201ENST00000390708 88 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms