Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 MIR5708-201ENST00000579723 85 ntBASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 MTCO2P2-201ENST00000591258 225 ntBASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 AP003973.1-201ENST00000604639 691 ntBASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 SNORA62.6-201ENST00000606322 83 ntBASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 RIOK3P1-201ENST00000418778 1528 ntBASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
CCDC71LQ8N9Z2 AL079305.1-201ENST00000623159 3008 ntBASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 ZNF29P-201ENST00000225587 168 ntBASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 RPL7P26-201ENST00000333817 754 ntBASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 MTCO1P56-201ENST00000401674 224 ntBASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 RPS4XP9-201ENST00000405151 780 ntBASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 PABPC1P7-201ENST00000413177 1513 ntBASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 BOLA3P4-201ENST00000418151 400 ntBASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 RPL31P12-201ENST00000422587 358 ntBASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 HSFY1P1-201ENST00000423928 1178 ntBASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 RAC1P8-201ENST00000427086 527 ntBASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 AC005345.1-201ENST00000431868 217 ntBASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 B3GNT2P1-201ENST00000434960 952 ntBASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 Z74696.2-201ENST00000436514 498 ntBASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 TBCAP1-201ENST00000436520 327 ntBASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 RRM2P4-201ENST00000441721 562 ntBASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 AL031313.1-201ENST00000448435 256 ntBASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 SSXP4-201ENST00000451349 245 ntBASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 AC104073.1-201ENST00000451988 151 ntBASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 RPS4XP22-201ENST00000480755 780 ntBASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 RNU2-27P-201ENST00000516185 142 ntBASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 AC022695.1-201ENST00000522089 237 ntBASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 IGKV2D-19-201ENST00000523346 262 ntBASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 OR4R3P-201ENST00000525084 838 ntBASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 MTCYBP41-201ENST00000528913 1123 ntBASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 AC107954.1-201ENST00000565906 727 ntBASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 BNIP3P38-201ENST00000601117 544 ntBASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 AL160237.3-201ENST00000604114 1013 ntBASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 AL050303.3-201ENST00000613704 284 ntBASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 U73479.1-201ENST00000618062 168 ntBASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 AC007496.3-201ENST00000624987 3443 ntBASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC71LQ8N9Z2 AC110774.1-201ENST00000623567 2018 ntBASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms