Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 HSPA8P1-201ENST00000425843 1833 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 AL079343.1-201ENST00000572358 1771 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 MTCO1P23-201ENST00000415223 1526 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 AC010300.1-201ENST00000600671 5134 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 OR5P1P-201ENST00000299512 925 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 RNU6-251P-201ENST00000363235 104 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 RNA5SP322-201ENST00000363617 119 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 RNA5SP175-201ENST00000364275 119 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 RNA5SP505-201ENST00000364748 108 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 SNORA75-201ENST00000384158 137 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 PRRC2CP1-201ENST00000404428 159 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 RPS16P5-201ENST00000406501 404 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 MIR1183-201ENST00000408856 89 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 AL139128.1-201ENST00000413921 941 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 AC009237.2-201ENST00000421358 284 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 AC233981.1-201ENST00000423224 461 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 MTND2P20-201ENST00000440805 661 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 BMI1P1-201ENST00000445879 941 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 RPS15AP1-201ENST00000457423 391 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 RPL21P71-201ENST00000465598 459 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 AC013828.1-201ENST00000481845 158 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 OR4G11P-201ENST00000492842 939 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 FTH1P24-201ENST00000503502 462 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 AC108145.1-201ENST00000503770 153 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 AC010460.1-201ENST00000507087 466 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 RNU6-583P-201ENST00000516012 92 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 AC245505.1-201ENST00000556398 224 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 PCMTD1P2-201ENST00000565017 355 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 AC017100.2-201ENST00000584628 355 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 RPL12P25-202ENST00000598100 674 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 AP003465.2-201ENST00000602571 373 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 AL356596.1-201ENST00000624230 379 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 AC097504.1-201ENST00000515103 2415 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 PNPT1P2-201ENST00000456768 2050 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 MTCO1P14-201ENST00000441695 1559 ntBASIC3.97□□□□□ -1.77
CLIP4Q8N3C7 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
CLIP4Q8N3C7 AL451142.2-201ENST00000429076 2090 ntBASIC3.96□□□□□ -1.77
CLIP4Q8N3C7 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 AC025125.1-201ENST00000624743 1922 ntBASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 RNA5SP388-201ENST00000362584 119 ntBASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 RNU6-433P-201ENST00000363216 104 ntBASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 RNU5F-7P-201ENST00000363696 115 ntBASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 RNU6-501P-201ENST00000364072 100 ntBASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 RNU4-91P-201ENST00000364778 135 ntBASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 RNU1-89P-201ENST00000384592 164 ntBASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 RNU6-146P-201ENST00000384602 108 ntBASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 MTCO3P31-201ENST00000405526 789 ntBASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 AL603766.1-201ENST00000407763 664 ntBASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 SNORA11F-201ENST00000408237 128 ntBASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 EIF4A1P3-201ENST00000411521 244 ntBASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 AL161631.1-201ENST00000417933 486 ntBASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 AL356387.2-201ENST00000422272 243 ntBASIC3.96□□□□□ -1.78
CLIP4Q8N3C7 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms