Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 HSPA8P1-201ENST00000425843 1833 ntBASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 AL391987.6-201ENST00000305671 199 ntBASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 Y_RNA.48-201ENST00000362710 103 ntBASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 SNORD8-201ENST00000363915 110 ntBASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 Y_RNA.199-201ENST00000364014 102 ntBASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 RFX3-203ENST00000381984 364 ntTSL 3 BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 RNU6-804P-201ENST00000384286 107 ntBASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 SNORA51.11-201ENST00000384442 131 ntBASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 RNU6-959P-201ENST00000384671 107 ntBASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 RN7SKP126-201ENST00000411143 300 ntBASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 AL139095.3-201ENST00000419672 1203 ntBASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 NME1P1-201ENST00000420914 382 ntBASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 AL035461.1-201ENST00000421490 332 ntBASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 USP9YP30-201ENST00000430729 455 ntBASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 HMGB3P24-201ENST00000433260 622 ntBASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 AC112187.1-201ENST00000455837 479 ntBASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 AC091021.1-201ENST00000468051 388 ntBASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 RN7SL799P-201ENST00000475891 298 ntBASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 RN7SL165P-201ENST00000477476 291 ntBASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 SIAH1P1-201ENST00000479411 923 ntBASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 AC011005.3-201ENST00000491624 395 ntBASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 TBCAP3-201ENST00000512475 312 ntBASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 SNORA40.14-201ENST00000516543 86 ntBASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 RNA5SP34-201ENST00000516887 130 ntBASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 uc_338.26-201ENST00000612659 160 ntBASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 AL627230.1-201ENST00000613077 211 ntBASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 AL365222.1-201ENST00000614661 98 ntBASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 AC025125.1-201ENST00000624743 1922 ntBASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 AC090740.1-201ENST00000623193 2262 ntBASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.14□□□□□ -1.43
NPAS3Q8IXF0 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 RNU6-1059P-201ENST00000363752 98 ntBASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 MIR105-2-201ENST00000385083 81 ntBASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 MRPL35P1-201ENST00000404272 572 ntBASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 AC093655.2-201ENST00000425735 631 ntBASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 AC099677.3-201ENST00000427081 395 ntBASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 AL359265.2-201ENST00000434367 631 ntBASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 RPL21P112-201ENST00000434403 463 ntBASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 NUTF2P3-201ENST00000448540 384 ntBASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 AC005297.2-201ENST00000450430 606 ntBASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 RN7SL72P-201ENST00000460697 269 ntBASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 AL133445.1-201ENST00000467051 452 ntBASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 AC087879.1-201ENST00000474343 374 ntBASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 RNU6-615P-201ENST00000516065 106 ntBASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 LSM3P2-201ENST00000551246 273 ntBASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 IGBP1P1-201ENST00000554337 1009 ntBASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 TXNP4-201ENST00000575018 310 ntBASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 AC011494.1-201ENST00000596454 237 ntBASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 AC020910.3-201ENST00000603701 874 ntBASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 AL031666.3-201ENST00000609320 1006 ntBASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 AC079776.5-201ENST00000641920 211 ntBASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NPAS3Q8IXF0 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms