Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC090142.1-201ENST00000465776 462 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.57□□□□□ -1.68
VRK3Q8IV63 RPL35P6-201ENST00000490024 372 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 RPL39P36-201ENST00000490784 156 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.57□□□□□ -1.68
VRK3Q8IV63 HMGN1P13-201ENST00000505795 138 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 MTND5P4-201ENST00000514978 288 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 OR5AN2P-201ENST00000534535 896 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.57□□□□□ -1.68
VRK3Q8IV63 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.57□□□□□ -1.68
VRK3Q8IV63 AL359212.1-201ENST00000556608 614 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.57□□□□□ -1.68
VRK3Q8IV63 AC093519.1-201ENST00000566109 298 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.57□□□□□ -1.68
VRK3Q8IV63 AC015912.2-201ENST00000571053 181 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.57□□□□□ -1.68
VRK3Q8IV63 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.57□□□□□ -1.68
VRK3Q8IV63 MIR3682-201ENST00000581338 84 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 MIR4795-201ENST00000584182 89 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 AC010928.3-201ENST00000587712 541 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 NRBF2P5-201ENST00000603087 788 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 AC087283.1-201ENST00000604029 1074 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 BNIP3P10-201ENST00000605360 577 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 AC090525.3-201ENST00000605601 189 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 AL050343.2-201ENST00000607338 280 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 AC097468.3-201ENST00000607956 456 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 Y_RNA.812-201ENST00000610788 101 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 Y_RNA.784-201ENST00000613803 101 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 Y_RNA.787-201ENST00000616522 101 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 Y_RNA.780-201ENST00000617336 101 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 Y_RNA.801-201ENST00000619005 101 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.57□□□□□ -1.68
VRK3Q8IV63 AC090574.1-201ENST00000623186 233 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 AC015871.5-202ENST00000623252 701 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.57□□□□□ -1.68
VRK3Q8IV63 AC006378.2-201ENST00000623178 2476 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
VRK3Q8IV63 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
VRK3Q8IV63 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VRK3Q8IV63 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.57□□□□□ -1.68
VRK3Q8IV63 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.56□□□□□ -1.68
VRK3Q8IV63 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
VRK3Q8IV63 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
VRK3Q8IV63 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.56□□□□□ -1.68
VRK3Q8IV63 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VRK3Q8IV63 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
VRK3Q8IV63 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
VRK3Q8IV63 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VRK3Q8IV63 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VRK3Q8IV63 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.56□□□□□ -1.68
VRK3Q8IV63 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VRK3Q8IV63 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
VRK3Q8IV63 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
VRK3Q8IV63 IGKV7-3-201ENST00000357453 298 ntBASIC4.56□□□□□ -1.68
VRK3Q8IV63 Y_RNA.326-201ENST00000365176 113 ntBASIC4.56□□□□□ -1.68
VRK3Q8IV63 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
VRK3Q8IV63 AL590004.1-201ENST00000405321 300 ntBASIC4.56□□□□□ -1.68
VRK3Q8IV63 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.56□□□□□ -1.68
VRK3Q8IV63 RNU6-908P-201ENST00000410160 94 ntBASIC4.56□□□□□ -1.68
VRK3Q8IV63 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.56□□□□□ -1.68
VRK3Q8IV63 AL136133.1-201ENST00000413694 376 ntBASIC4.56□□□□□ -1.68
VRK3Q8IV63 AL354751.2-201ENST00000415471 210 ntBASIC4.56□□□□□ -1.68
VRK3Q8IV63 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.56□□□□□ -1.68
VRK3Q8IV63 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.56□□□□□ -1.68
VRK3Q8IV63 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.56□□□□□ -1.68
VRK3Q8IV63 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.56□□□□□ -1.68
VRK3Q8IV63 AC005534.2-201ENST00000431047 433 ntBASIC4.56□□□□□ -1.68
VRK3Q8IV63 AC006466.1-201ENST00000438721 289 ntBASIC4.56□□□□□ -1.68
VRK3Q8IV63 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.56□□□□□ -1.68
VRK3Q8IV63 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.56□□□□□ -1.68
VRK3Q8IV63 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.56□□□□□ -1.68
VRK3Q8IV63 YWHAQP9-201ENST00000445891 512 ntBASIC4.56□□□□□ -1.68
VRK3Q8IV63 AC104651.2-201ENST00000447549 528 ntBASIC4.56□□□□□ -1.68
VRK3Q8IV63 MTCO1P27-201ENST00000448269 226 ntBASIC4.56□□□□□ -1.68
VRK3Q8IV63 AL591623.2-201ENST00000449978 222 ntBASIC4.56□□□□□ -1.68
VRK3Q8IV63 FABP3P2-201ENST00000453169 399 ntBASIC4.56□□□□□ -1.68
VRK3Q8IV63 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.56□□□□□ -1.68
VRK3Q8IV63 AC025164.1-201ENST00000496249 478 ntBASIC4.56□□□□□ -1.68
VRK3Q8IV63 NIPA2P2-201ENST00000496376 1083 ntBASIC4.56□□□□□ -1.68
VRK3Q8IV63 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.56□□□□□ -1.68
VRK3Q8IV63 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.56□□□□□ -1.68
VRK3Q8IV63 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
VRK3Q8IV63 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
VRK3Q8IV63 POU5F1P7-201ENST00000508759 541 ntBASIC4.56□□□□□ -1.68
VRK3Q8IV63 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
VRK3Q8IV63 AC006499.2-201ENST00000513470 337 ntBASIC4.56□□□□□ -1.68
VRK3Q8IV63 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.56□□□□□ -1.68
VRK3Q8IV63 Y_RNA.675-201ENST00000516389 149 ntBASIC4.56□□□□□ -1.68
VRK3Q8IV63 HIGD1AP6-201ENST00000521833 279 ntBASIC4.56□□□□□ -1.68
VRK3Q8IV63 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.56□□□□□ -1.68
VRK3Q8IV63 AP003122.4-201ENST00000530980 758 ntBASIC4.56□□□□□ -1.68
VRK3Q8IV63 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.56□□□□□ -1.68
VRK3Q8IV63 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.56□□□□□ -1.68
VRK3Q8IV63 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.56□□□□□ -1.68
VRK3Q8IV63 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.56□□□□□ -1.68
VRK3Q8IV63 NRBF2P1-201ENST00000587407 859 ntBASIC4.56□□□□□ -1.68
VRK3Q8IV63 AL162730.1-201ENST00000605734 292 ntBASIC4.56□□□□□ -1.68
VRK3Q8IV63 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.56□□□□□ -1.68
VRK3Q8IV63 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms